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Protein
Submitted name:

Uncharacterized protein

Gene

POPTR_0008s11330g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. phosphoenolpyruvate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:POPTR_0008s11330gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
ProteomesiUP000006729: Linkage group LGVIII

Interactioni

Protein-protein interaction databases

STRINGi3694.eugene3.00081063.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
InParanoidiB9HIW8.
KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9HIW8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTDTTDDIAE EISFQGFDDY CKLLKNLLND VLQREVGTDF VEKLERNRTL
60 70 80 90 100
AQSACNLRLA GIEDTAELLE KQLASEISKM TLEEALTLAR AFSHYLNLMG
110 120 130 140 150
IAETHHRVRK TRDLAHLSKS CDEVFNQLLQ GGTSADELYD SVCKQEVEIV
160 170 180 190 200
LTAHPTQINR RTLQYKHVRI AHLLDYNDRP DLTQEDREML IEDLVREITS
210 220 230 240 250
IWQTDELRRH KPTPADEARS GLHIVEQSLW KAVPHYLRRV STALKKHTGK
260 270 280 290 300
PLPLTCTPIK FGSWMGGDRD GNPNVTAKVT RDVSLLSRWM AIDLYIREAD
310 320 330 340 350
SLRFELSMSR CSDKLSREAH DILEQETSPE DRHEGWNQLM SRNQTKHHGQ
360 370 380 390 400
QTPSLPTQLP ATADLPSCTD SSHGCCKSIT NGSTANSDSH QSAPSPRGSF
410 420 430 440 450
TSSQLLAQRK LLAESKIVRS SFQKLLEPSL PQRPGIAPYR IVLGHVKDKL
460 470 480 490 500
TKTRRRLELL LEDLPCEYEP WDYYETTDQL LEPLLLCYES LQSCGAGVLA
510 520 530 540 550
DGRLADLIRR VATFGMVLMK LDLRQESGRH SEALDAITKY LDMGTYSEWD
560 570 580 590 600
EEKKLEFLTR ELKSKRPLVP STIQVTPDVK EVLDTFRVAA ELGSDSLGAY
610 620 630 640 650
VISMASNASD VLAVELLQKD ARLAVSGELG KPCPGGTLRV VPLFETVKDL
660 670 680 690 700
RGAGLVIRKL LSIDWYSEHI IKNHSGHQEV MVGYSDSGKD AGRFTAAWEL
710 720 730 740 750
YKAQEDVVAA CKDNQIKVTL FHGRGGSIGR GGGPTYLAIQ SQPPGSVMGT
760 770 780 790 800
LRSTEQGEMV QAKFGLPHTA VRQLEIYTTA VLLATLKPPE RPREEKWRNL
810 820 830 840 850
MDEISKISCQ SYRSTVYENP EFLAYFHEAT PQAELGFLNI GSRPTRRKSS
860 870 880 890 900
TGIGHLRAIP WVFAWTQTRF VLPAWLGVGA GLKGVCEKGH TQDLKAMYKE
910 920 930 940 950
WPFFQSTIDL IEMVLGKADV PIAKHYDEVL VSDKSRRELG AALRRELLTT
960 970 980 990 1000
EKFVLVVSGH ERLSENNRSL RRLIESRLPY LNPINMLQVE ILKRLRSDDD
1010 1020
NHKLRDALLI TINGIAAGMR NTG
Length:1,023
Mass (Da):115,090
Last modified:December 11, 2013 - v2
Checksum:iE1AEF779AB0E1DC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000344 Genomic DNA. Translation: EEE89738.2.
RefSeqiXP_002312371.2. XM_002312335.2.

Genome annotation databases

GeneIDi7485946.
KEGGipop:POPTR_0008s11330g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000344 Genomic DNA. Translation: EEE89738.2.
RefSeqiXP_002312371.2. XM_002312335.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.eugene3.00081063.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7485946.
KEGGipop:POPTR_0008s11330g.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
InParanoidiB9HIW8.
KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
    Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A.
    , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
    Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NisquallyImported.

Entry informationi

Entry nameiB9HIW8_POPTR
AccessioniPrimary (citable) accession number: B9HIW8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: December 11, 2013
Last modified: January 7, 2015
This is version 34 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.