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B9HG99 (B9HG99_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE90158.1
Gene names
ORF Names:POPTRDRAFT_1081730 EMBL EEE90158.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcell death

Inferred from electronic annotation. Source: InterPro

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9HG99 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 35C648BEDAC0CCD1

FASTA48155,070
        10         20         30         40         50         60 
MAEGGTTLEY TPTWVVAAVC SVIVLISLIV ERFLHLLGKL LKRKHQKPLF EALQKIKEEL 

        70         80         90        100        110        120 
MLLGFISLLL TVFQGRINTI CISEDLSKKM LPCKKETKGT TAHFQAFFSF FPGGTSRRLL 

       130        140        150        160        170        180 
AEDSPANSCP EGKVPMLSTT ALHHLHIFIF VLACVHVVFC ALTILFGSAK IRQWKRWEDS 

       190        200        210        220        230        240 
ISNKEQDPEQ GIAYPKLTNV QDHDFIKTRY LGFGKNSYFL GWVQSFFKQF YGSVTRSDYI 

       250        260        270        280        290        300 
TLRLGFIMTH CRGNLKFNFH KYMMRALEAD FKKVVGISWY LWLFVVLFLL LNVAGWHAYF 

       310        320        330        340        350        360 
WIAFIPFILL LAVGTKLEHV ISQLAHEVAE KHVAVQGDLV VHPSDDHFWF NKPKIVLILI 

       370        380        390        400        410        420 
HIILFQNSFE MAFFFWIWLQ YGFDSCIMGQ VSYIIPRLVI GAFIQLLCSY STLPLYAIVT 

       430        440        450        460        470        480 
QMGSSFKKAI FDEHVQEGLV GWAKQAKKKT VLRKAANEST HNQVVHREES PLIQMAKAGS 


K

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000343 Genomic DNA. Translation: EEE90158.1.
RefSeqXP_002309708.1. XM_002309672.1.
UniGenePth.5040.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0007s00240.1; POPTR_0007s00240.1; POPTR_0007s00240.
GeneID7465598.
KEGGpop:POPTR_1081730.

Phylogenomic databases

GeneTreeEPGT00050000013153.
PhylomeDBB9HG99.
ProtClustDBCLSN2716977.

Family and domain databases

InterProIPR004326. Mlo.
[Graphical view]
PfamPF03094. Mlo. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9HG99_POPTR
AccessionPrimary (citable) accession number: B9HG99
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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