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Protein
Submitted name:

NOL1/NOP2/sun family protein

Gene

POPTR_0007s05110g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
NOL1/NOP2/sun family proteinImported
Gene namesi
ORF Names:POPTR_0007s05110gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componenti: Linkage group LGVII

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0007s05110.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini77 – 486410SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2198. Eukaryota.
COG0144. LUCA.
HOGENOMiHOG000205147.
InParanoidiB9HFE1.
KOiK15334.
OMAiDLQCPIV.

Family and domain databases

Gene3Di3.40.50.150. 2 hits.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR023267. RCMT.
IPR023270. RCMT_NCL1.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02011. RCMTNCL1.
SUPFAMiSSF53335. SSF53335. 2 hits.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9HFE1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGRGRGSRS RTQRKHFRDG RENVWKRPKS DSASSDPNSN NNSENKTHWQ
60 70 80 90 100
PFATQNPAFD EYYKEQGIVT AEEWDTFVEV LRTPLPAAFR INSSSQFCED
110 120 130 140 150
IKSQLENDFM NSLKAETTDG GEVEAIRPLP WYPDNLAWHS NFSRMQLRKN
160 170 180 190 200
QTLERFHEFL KLENEIGNIT RQEAVSMVPP LFLDVRPDHF VFDMCAAPGS
210 220 230 240 250
KTFQLLEIIY QSTKSGSLPD GMVMANDLDV QRCNLLIHQT KRMCTANLIV
260 270 280 290 300
TNNEAQHFPG CRADKNGSKA SEMEIEPQIS QLLFDRVLCD VPCSGDGTLR
310 320 330 340 350
KAPDMWRKWN PGMGNGLHSL QIQIAMRGLS LLKVGGRMVY STCSMNPVED
360 370 380 390 400
EAVVAEILRK CGGSVELVDV SSELPQLVRR PGVRKWKVRD KDLWLASHKD
410 420 430 440 450
VSKFQRYHIL PSMFPSGKSY VAPANKDLEH ENGENAISED GIQPTEDAST
460 470 480 490 500
EDLIEEVSDL PLERCMRIVP HDQNSGAFFI AVLQKLSPLP AIQEKPCKKR
510 520 530 540 550
NLFKKNPELQ GKLLDQVTED NSGLEPDSRD VAVEKISEAA TEADLIAVGK
560 570 580 590 600
RKLQLQGKWK GVDPVLFFKD ESIINSIKMF YGIDESFPFD GHLISRNSDK
610 620 630 640 650
NHVKRIYYVS KSVKDVLGLN FRVGQQLKIA SIGLKMFERQ TSREGTSTPC
660 670 680 690 700
SFRISSEGLP VILPHITNQI LYASSVDFKH LLQYKAIKFA DFVDAEFGEK
710 720 730 740 750
ASKLMMGCCV IVMRDSKTML DPTKVDASTI AIGCWKGRSN LNVMVTAIDC
760 770 780 790
QELLERLSVR MEAEKGSSVQ ENKINVDDLQ LNGASKVEES ETTQLVADA
Length:799
Mass (Da):89,865
Last modified:March 24, 2009 - v1
Checksum:iD3FF71F83212873F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000343 Genomic DNA. Translation: EEE90416.1.
RefSeqiXP_002309966.1. XM_002309930.2.

Genome annotation databases

EnsemblPlantsiPOPTR_0007s05110.1; POPTR_0007s05110.1; POPTR_0007s05110.
GeneIDi7490197.
GrameneiPOPTR_0007s05110.1; POPTR_0007s05110.1; POPTR_0007s05110.
KEGGipop:POPTR_0007s05110g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000343 Genomic DNA. Translation: EEE90416.1.
RefSeqiXP_002309966.1. XM_002309930.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.POPTR_0007s05110.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPOPTR_0007s05110.1; POPTR_0007s05110.1; POPTR_0007s05110.
GeneIDi7490197.
GrameneiPOPTR_0007s05110.1; POPTR_0007s05110.1; POPTR_0007s05110.
KEGGipop:POPTR_0007s05110g.

Phylogenomic databases

eggNOGiKOG2198. Eukaryota.
COG0144. LUCA.
HOGENOMiHOG000205147.
InParanoidiB9HFE1.
KOiK15334.
OMAiDLQCPIV.

Family and domain databases

Gene3Di3.40.50.150. 2 hits.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR023267. RCMT.
IPR023270. RCMT_NCL1.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02011. RCMTNCL1.
SUPFAMiSSF53335. SSF53335. 2 hits.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
    Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A.
    , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
    Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NisquallyImported.

Entry informationi

Entry nameiB9HFE1_POPTR
AccessioniPrimary (citable) accession number: B9HFE1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 11, 2016
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.