B9HE28 (B9HE28_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE92120.1

Gene names

ORF Names:

POPTRDRAFT_819535 EMBL EEE92120.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	967 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 protein kinase domain. SAAS SAAS013210

Ontologies

Keywords
Cellular component	Membrane
Domain	Leucine-rich repeat SAAS SAAS013210 Repeat SAAS SAAS013210 Transmembrane Transmembrane helix SAAS SAAS013210
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro protein kinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9HE28 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 2BAFDA85B41C29B0	FASTA	967	106,422
	10 20 30 40 50 60 MAAAKGPQAC SMLFMFWFLV LNSRMLHADN QELELLLSFK SSLNDPLKYL SNWNPSATFC 70 80 90 100 110 120 KWQGITCTNS SRITVIELSG KNISGKISSS IFQLPYIQTI DLSSNQLSGK LPDDIFSSSS 130 140 150 160 170 180 LRFLNLSNNN FTGPIPNGSI FLLETLDLSN NMLSGKIPQE IGSFSSLKFL DLGGNVLVGK 190 200 210 220 230 240 IPLSVTNLTS LEVLTLASNQ LVGQIPSELG QMRSLKWIYL GYNNLSGEIP IELGQLTSLN 250 260 270 280 290 300 HLDLVYNNLT GQIPSSLGNL SNLQYLFLYQ NMLAGPIPKS IFGLTKLISL DLSDNSLSGE 310 320 330 340 350 360 IPELIIKLKN LEILHLFSNN FTGKIPVALS SLPRLQILQL WSNKLSGEIP KDLGKRNNLT 370 380 390 400 410 420 VLDLSSNSLT GRIPEGLCSS GNLFKLILFS NSLEDEIPKS LSTCNSLRRV RLQDNSLSGE 430 440 450 460 470 480 LSSEFTKLPL VYFLDISSNN LSGRIDSRKW EMPSLQMLSL ARNSFLGGLP DSFGSENLEN 490 500 510 520 530 540 LDLSQNLFSG AIPRKFGSLS EIMQLRLSKN KISGEIPDEL SSCEKLVSLD LSHNKLSGQI 550 560 570 580 590 600 PASFSEMPVL GLLDLSHNEL SGKIPANLGR VESLVQVNIS HNHFHGSLPS TGAFLAINAS 610 620 630 640 650 660 AIAGNDLCGG DKTSGLPPCR RVKSPMWWFY VACSLGALVL LALVAFGFVF IRGQRNLELK 670 680 690 700 710 720 RVENEDGTWE LQFFNSKVSK SIAIDDILLS MKEENLISRG KKGASYKGKS ITNDMEFIVK 730 740 750 760 770 780 KMNDVNSIPL SEISELGKLQ HPNIVNLFGL CQSNKVAYVI YEYIEGKSLS EVLLNLSWER 790 800 810 820 830 840 RRKIAIGIAK ALRFLHCYCS PSVLAGYMSP EKIIIDGKDE PRLILSLPSL LCIETTKCFI 850 860 870 880 890 900 SSAYVAPETR ETKDITEKSD MYGFGLILIE LLTGKGPADA EFGGHESIVE WARYCYSDCH 910 920 930 940 950 960 LDMWIDPMIS GNASINQNEL IETMNLALQC TATEPTARPC ANEVSKTLES ALRKSSCVLG LKFSSLF

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000342 Genomic DNA. Translation: EEE92120.1.
RefSeq	XP_002308597.1. XM_002308561.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7470737.
KEGG	pop:POPTR_819535.
Phylogenomic databases
GeneTree	EPGT00070000028226.
OMA	KSDIYGF.
ProtClustDB	PLN00113.
Family and domain databases
InterPro	IPR011009. Kinase-like_dom. IPR001611. Leu-rich_rpt. IPR013210. LRR-contain_N2. IPR000719. Prot_kinase_cat_dom. IPR017442. Se/Thr_kinase-like_dom. [Graphical view]
Pfam	PF00560. LRR_1. 7 hits. PF08263. LRRNT_2. 1 hit. PF00069. Pkinase. 1 hit. [Graphical view]
SUPFAM	SSF56112. Kinase_like. 1 hit.
PROSITE	PS50011. PROTEIN_KINASE_DOM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9HE28_POPTR

Accession

Primary (citable) accession number: B9HE28

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)