B9HCP8 (B9HCP8_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE92977.1

Gene names

ORF Names:

POPTRDRAFT_716762 EMBL EEE92977.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	317 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	FAD SAAS SAAS001834 Flavoprotein SAAS SAAS001834 NAD SAAS SAAS001834
Molecular function	Oxidoreductase SAAS SAAS001834
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9HCP8 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 389AABCA3F2D3D34	FASTA	317	34,740
	10 20 30 40 50 60 MASTFFRRLS KATPVSFGGQ PKSTFGAIAA VTGGISYLYY YNSPNLAHLE EVKVEGSPKV 70 80 90 100 110 120 ALNPDKWIEF KLQDTARVSH NTHLFRFSFD PAAKLGLDIA SCIITRAPIG QDAEGKTKYV 130 140 150 160 170 180 VRPYTPISDP DSKGYFDLLI KVYPEGKMSQ HFATLKSGDV VEVKGPIEKL RYSPNMKKHI 190 200 210 220 230 240 GMIAGGTGIT PMLQVIEAIL KNPDDNTQVS LLYANVSPDD ILLKQKLDFL AASHPNLKIF 250 260 270 280 290 300 YTVDNPSKNW KGGSGFISKD MVVKGLPGPC DDTLILVCGP PGMMKHISGD KAKDRSQGEL 310 TGLLKEAGYT EEMVYKF

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000342 Genomic DNA. Translation: EEE92977.1.
RefSeq	XP_002309454.1. XM_002309418.1.
UniGene	Pth.9833.
3D structure databases
ProteinModelPortal	B9HCP8.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7491977.
KEGG	pop:POPTR_716762.
Phylogenomic databases
GeneTree	EPGT00070000030746.
OMA	RYSPNMK.
ProtClustDB	CLSN2686350.
Family and domain databases
InterPro	IPR017927. Fd_Rdtase_FAD-bd. IPR001709. Flavoprot_Pyr_Nucl_cyt_Rdtase. IPR001834. NADH-Cyt_B5_reductase. IPR008333. OxRdtase_FAD-bd_dom. IPR001433. OxRdtase_FAD/NAD-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view]
KO	K00326.
Pfam	PF00970. FAD_binding_6. 1 hit. PF00175. NAD_binding_1. 1 hit. [Graphical view]
PRINTS	PR00406. CYTB5RDTASE. PR00371. FPNCR.
SUPFAM	SSF63380. Riboflavin_synthase_like_b-brl. 1 hit.
PROSITE	PS51384. FAD_FR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9HCP8_POPTR

Accession

Primary (citable) accession number: B9HCP8

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)