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B9HC28 (B9HC28_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE91374.1
Gene names
ORF Names:POPTRDRAFT_560099 EMBL EEE91374.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionmethyltransferase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9HC28 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 9161D9A9524295C0

FASTA32838,333
        10         20         30         40         50         60 
MEEEKESEQN DQNTLESQPN SQPTPLSKNA QKKLLKQQKW EAKKAEKKAQ VKEQKMKEAE 

        70         80         90        100        110        120 
RKRKEWEERL SSCASEEERL KLIESRRELR KERMEKRAEE KEDKVQRLSK AKEFGQNIVI 

       130        140        150        160        170        180 
DLEFADLMTN SEIHSLVQQI MYCYAVNRRC TSPGHLWLTG CRGEMENQLQ RLPGFDKWII 

       190        200        210        220        230        240 
EKESQSYIDA LQDQKENLVY LTADSETVLD ELDLKKIYII GGLVDRNRWK GITMKKASEQ 

       250        260        270        280        290        300 
GIQTAKLPIG SYLKMSSSQV LTVNQVVEIL LKFVEIKDWK ASFFQVIPQR KRGETDSEEL 

       310        320 
QGVDGEELEN EDDPSDKKKR CIEVRSTQ

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000342 Genomic DNA. Translation: EEE91374.1.
RefSeqXP_002307851.1. XM_002307815.1.
UniGenePth.11530.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0006s00680.1; POPTR_0006s00680.1; POPTR_0006s00680.
GeneID7463648.
KEGGpop:POPTR_560099.

Phylogenomic databases

GeneTreeEPGT00050000008147.
OMAGAFVDHN.
PhylomeDBB9HC28.
ProtClustDBCLSN2686396.

Family and domain databases

InterProIPR016009. tRNA_m1G_MeTrfase.
IPR007356. tRNA_m1G_MeTrfase_euk.
IPR016653. tRNA_m1G_mtfrase_met.
[Graphical view]
KOK15445.
PANTHERPTHR13563. DUF425. 1 hit.
PfamPF01746. tRNA_m1G_MT. 1 hit.
[Graphical view]
PIRSFPIRSF016323. tRNA_m1G_mtfrase_met. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9HC28_POPTR
AccessionPrimary (citable) accession number: B9HC28
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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