B9HBX3 (B9HBX3_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE91981.1

Gene names

ORF Names:

POPTRDRAFT_867143 EMBL EEE91981.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	934 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003537 TPR repeat RuleBase RU003339
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9HBX3 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 4A6475AEB93669FC	FASTA	934	103,844
	10 20 30 40 50 60 MAWTENDAGN VREKEPTGDN GFLKGSQPSP DPSGSRVGSS PAQKGFDGKD ALSYANILRS 70 80 90 100 110 120 RNKFADALAL YESALENDSG NVEAYIGKGI CLQMQNMERL AFDSFAEAIK LDPENACALT 130 140 150 160 170 180 HCGILYKDEG RLLEAAESYH KALKADPSYK PASECLAIVL TDLGTSLKLS GNTQEGIQKY 190 200 210 220 230 240 YDALKVDPHY APAYYNLGVV YSEMMQYDTA LSCYEKAAIE RPMYAEAYCN MGVIYKNRGD 250 260 270 280 290 300 LESAIACYER CLAVSPNFEI AKNNMAIALT DLGTKVKLEG DINQGVTYYK KALYYNWHYA 310 320 330 340 350 360 DAMYNLGVAY GEMLKFEMAI VFYELAFHFN PHCAEACNNL GVIYKDRDNL DKAVECYQAT 370 380 390 400 410 420 LSIKPNFSQS LNNLGVVYTV QGKMDAAASM IEKAIMANPT YAEAYNNLGV LYRDVGNITM 430 440 450 460 470 480 AISAYEQCLE IDPDSRNAGQ NRLLAMNYIN EGHDDKLFQA HREWGRRFMR LYPQFTSWDN 490 500 510 520 530 540 PKVPERPLVI GYVSPDYFTH SVSYFIEAPL VYHDYANYMV VVYSAVVKSD AKTNRFREKV 550 560 570 580 590 600 LKKGGMWRDI YGIDEKKVAS MIREDKVDIL VELTGHTANN KLGMMACRPA PVQVTWIGYP 610 620 630 640 650 660 NTTGLPTIDY RITDSFTDPP HTKQKHVEEL VRLPECFLCY IPSPEAGPVT PTPALSNGFI 670 680 690 700 710 720 TFGSFNNLAK ITPKVLQVWA RILCAVPNSR LVVKCKPFGC DSVRQRFLTV LEQLGLEPLR 730 740 750 760 770 780 VDLLPLILLN HDHMQAYSLM DISLDTFPYA GTTTTCESLY MGVPCITMAG AVHAHNVGVS 790 800 810 820 830 840 LLSKVGLGHL VAKNEEEYVQ LALQLASDIS ALSNLRMSLR ELMSKSPVCD GPNFTLGLET 850 860 870 880 890 900 TYRNMWHRYC KGDVPSLRRI ELLQQQGIPE DVPIKNSDST TITSSRDGPP ESRDGLPESV 910 920 930 KANGFSAVSP PTVNHSCGEN RSQVNNTINS GKLS

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000342 Genomic DNA. Translation: EEE91981.1.
RefSeq	XP_002308458.1. XM_002308422.1.
3D structure databases
ProteinModelPortal	B9HBX3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7492241.
KEGG	pop:POPTR_867143.
Phylogenomic databases
OMA	AITAKIF.
ProtClustDB	CLSN2684418.
Family and domain databases
InterPro	IPR006597. Sel1-like. IPR001440. TPR-1. IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 2 hits.
Pfam	PF00515. TPR_1. 5 hits. [Graphical view]
SMART	SM00671. SEL1. 5 hits. SM00028. TPR. 11 hits. [Graphical view]
PROSITE	PS50005. TPR. 11 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9HBX3_POPTR

Accession

Primary (citable) accession number: B9HBX3

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)