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B9HBV0 (B9HBV0_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE92603.1
Gene names
ORF Names:POPTRDRAFT_762397 EMBL EEE92603.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length505 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B9HBV0 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 932662C7B28B5C35

FASTA50557,567
        10         20         30         40         50         60 
MSSPTPSIQD PFKAWKFLVL PTLKVSDVFS LFLKATIAIC TFVSISLVFY SFLNQSQWQP 

        70         80         90        100        110        120 
CPECHKSLIS DHRKITNGNV SGDFYEKTNI SHILFGIGGS AKTWNKRRHY TELWWMPKIT 

       130        140        150        160        170        180 
RGYVWLDQKP PENRTWPETS PEYKVSADTS RFKYTCSYGS RSALRIARIV KESFELGEEN 

       190        200        210        220        230        240 
VRWFVMGDDD TVFFIENLVM VLAKYDHNQM YYIGGNSESV EQDVIHSYTM AYGGGGFAIS 

       250        260        270        280        290        300 
YPLAKELVRV LDGCIDRYAS FYGSDQKIQG CMSEIGVPLT KELGFHQVDI RGDPYGLLAA 

       310        320        330        340        350        360 
HPLAPLVSLH HLDYVQSIFP KLNRIDSVKK LISSYKMDPG RALQYSFCYD LTRNWSVSAS 

       370        380        390        400        410        420 
WGYTIQIHPS LMTAKQLESA FRTFQTWRSW SNGPFTFNTR PMSQHPCLRP VVYFLDRVER 

       430        440        450        460        470        480 
VGDGTLTTYK RSLQEFGQVC DLPEYAPVLA VKLVNVTTST SLKPDIWNLA PRRQCCEVIK 

       490        500 
GEDGVNSVVQ LNIRGCNQFE SVTPP

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000342 Genomic DNA. Translation: EEE92603.1.
RefSeqXP_002309080.1. XM_002309044.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7487270.
KEGGpop:POPTR_762397.

Phylogenomic databases

GeneTreeEPGT00050000000455.
OMADIRGNPY.
ProtClustDBCLSN2688758.

Family and domain databases

InterProIPR006740. DUF604.
[Graphical view]
PfamPF04646. DUF604. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9HBV0_POPTR
AccessionPrimary (citable) accession number: B9HBV0
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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