B9HA65 (B9HA65_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE92490.1

Gene names

ORF Names:

POPTRDRAFT_762147 EMBL EEE92490.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	793 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	EGF-like domain RuleBase RU000458
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9HA65 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: D91A919B2BF3B92C	FASTA	793	90,022
	10 20 30 40 50 60 MITISKWKCS WSLMATIASI VALVSVVHLF LFPVVPSFDP FSVWQVQDSC GPNNESVDGR 70 80 90 100 110 120 TGHDPGNLQP VLDLEHKFPA DLHRAVFYRN APWKAEIGRW LSGCDAVTKE VSVVETISGR 130 140 150 160 170 180 SCKNDCSGQG VCNYELGQCR CFHGFSGEGC SERLHLECNY PKSPELPYGR WVVSICSAHC 190 200 210 220 230 240 DPTRAMCFCG EGTKYPNRPA AETCGFQLSL PSEIGAPRQV DWAKPDLDIY TTNKSKLGWC 250 260 270 280 290 300 NVDPAEGYAN KVKFKEECDC KYDCLSGRFC EVPVQCSCIN QCSGHGHCRG GFCQCANGWY 310 320 330 340 350 360 GTDCSIPSVT SSVREWPRWL RPAQLDVPDN AHLTGKLVDL NAVVKKKRPL IYIYDLPPKF 370 380 390 400 410 420 NSLLLEGRHF KFECVNRLYN DNNATIWTDQ LYGAQMALYE SILASPYRTL NGEEADFFFV 430 440 450 460 470 480 PVLDSCIITR ADDAPHLSME QHLGLRSSLT LEFYRKAYDH IVEHYPFWNR SSGRDHLWSF 490 500 510 520 530 540 SWDEGACYAP KEIWNSMMVV HWGNTNSKHN HSTTAYWADN WDKISSDRRG KHPCFDPDKD 550 560 570 580 590 600 LVLPAWKRPD VNALSTKLWA RPLEKRKTLF YFNGNLGPAY LNGRPEALYS MGIRQKLAEE 610 620 630 640 650 660 FGSTPNKDGN LGKQHAENVI VSPLRSESYH EDLASSVFCG VMPGDGWSGR MEDSILQGCI 670 680 690 700 710 720 PVVIQDGIYL PYENVLNYES FAVRILEDEI PNLIKILQGF NETEIENKLT SVQKIGQRFL 730 740 750 760 770 780 YRDSMLLEAE RQKTAFGYVE DWAVEFLRLT EDDVVATFVQ VLHYKLHNDP WRRQLGSQKK 790 DFGLPQECLM RTS

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000342 Genomic DNA. Translation: EEE92490.1.
RefSeq	XP_002308967.1. XM_002308931.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7485455.
KEGG	pop:POPTR_762147.
Phylogenomic databases
GeneTree	EPGT00070000030865.
OMA	DEGACYA.
ProtClustDB	CLSN2680922.
Family and domain databases
InterPro	IPR006210. EGF-like. IPR013032. EGF-like_reg_CS. IPR000742. EGF_3. IPR004263. Exostosin. [Graphical view]
Pfam	PF03016. Exostosin. 1 hit. [Graphical view]
SMART	SM00181. EGF. 1 hit. [Graphical view]
PROSITE	PS00022. EGF_1. 2 hits. PS01186. EGF_2. 2 hits. PS50026. EGF_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9HA65_POPTR

Accession

Primary (citable) accession number: B9HA65

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)