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B9H9U7 (B9H9U7_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:POPTR_0006s04960g EMBL EEE92469.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome] EMBL EEE92469.1
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus

Protein attributes

Sequence length1364 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processchlorophyll biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmitochondrion

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionmagnesium chelatase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9H9U7 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 5C99807950BB47C4

FASTA1,364151,232
        10         20         30         40         50         60 
MASLVSSPFT LQSIKPDQLS SPSQKHYFLH SFVPRKINQT SLKSSLKVKC AAIGNGLFTQ 

        70         80         90        100        110        120 
TTQEVRRIVP ENNQNLPTVK IVYVVLEAQY QSSLTAAVQA LNKSSKDASY EVVGYLVEEL 

       130        140        150        160        170        180 
RDASTYKTFC KDLEDANIFI GSLIFVEELA LKVKTAVEKE RDRLDAVLVF PSMPEVMRLN 

       190        200        210        220        230        240 
KLGSFSMSQL GQSKSPFFQL FKKKKQGAGF ADSMLKLVRT LPKVLKYLPS DKAQDARLYI 

       250        260        270        280        290        300 
LSLQFWLGGS PDNLQNFLKM ISGSYVPALK GKKIAYSDPV LFLDSGIWHP LAPCMYEDAK 

       310        320        330        340        350        360 
EYLNWYGTRR DANEKLKDPN APVIGLVLQR SHIVTGDESH YVAVIMELEA RGAKVIPIFA 

       370        380        390        400        410        420 
GGLDFSGPVE RYLIDPVTKK PMVNSVISLT GFALVGGPAR QDHPRAIEAL SKLDVPYIVA 

       430        440        450        460        470        480 
LPLVFQTTEE WLNSTLGLHP IQVALQVALP ELDGGMEPIG NHMLFTKGWS SSAREQSDGT 

       490        500        510        520        530        540 
EKKLAITVFS FPPDKGNVGT AAYLNVFSSI FSVLKELERD GYNVEGLPET SEALIEDILH 

       550        560        570        580        590        600 
DKEAQFSSPN LNIAYKMGVR EYQSLTSYAT ALEENWGKPP GNLNSDGENL LVYGKQYGNV 

       610        620        630        640        650        660 
FIGVQPTFGY EGDPMRLLFS KSASPHHGFA AYYSFVEKIF KADAVLHFGT HGSLEFMPGK 

       670        680        690        700        710        720 
QVGMSDACFP DSLIGNIPNV YYYAANNPSE ATIAKRRSYA NTISYLTPPA ENAGLYKGLK 

       730        740        750        760        770        780 
QLSELISSYQ SLKDTGRGPQ IVSSIISTAR QCNLDKDVEL PEEGEEISAK ERDLVVGKVY 

       790        800        810        820        830        840 
SKIMEIESRL LPCGLHVIGE PPSAMEAVAT LVNIAALDRP EDEISSLPSI LAETVGRNIE 

       850        860        870        880        890        900 
DVYRESDKGI LKDVELLRKI TEASRGAVSA FVQKTTNKKG QVVDVADKLS SILGFGINEP 

       910        920        930        940        950        960 
WVDYLSSTKF YQADRDKLRT LFRFLGDCLK LIVADNELGS LKQALEGKYV EPGPGGDPIR 

       970        980        990       1000       1010       1020 
NPKVLPTGKN IHALDPQSIP TTAAMQSAKV VVDRLIERQK ADNGGKYPET VALVLWGTDN 

      1030       1040       1050       1060       1070       1080 
IKTYGESLAQ VLWMIGVMPV ADTFGRVNRV ELVSLEELGR PRIDVVVNCS GVFRDLFINQ 

      1090       1100       1110       1120       1130       1140 
MNLLDRAVKM VAELDEPADQ NFVRKHALEQ AEALGVDIRE AATRIFSNAS GSYSSNINLA 

      1150       1160       1170       1180       1190       1200 
VENSSWNDEK QLQDMYLSRK SFAFDCDAPG AGMAEKRKVF EMALSTAEAT FQNLDSSEIS 

      1210       1220       1230       1240       1250       1260 
LTDVSHYFDS DPTNLVQNLR KDKKKPNAYI ADTTTANAQV RTLSETVRLD ARTKLLNPKW 

      1270       1280       1290       1300       1310       1320 
YEGMLSTGYE GVREIEKRLT NTVGWSATSG QVDNWVYEEA NSTFIQDEEM LNKLMSTNPN 

      1330       1340       1350       1360 
SFRKMLQTFL EANGRGYWET SQDNIEKLRQ LYSEVEDKIE GIDR 

« Hide

References

« Hide 'large scale' references
[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.
[2]US DOE Joint Genome Institute (JGI-PGF)
Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. expand/collapse author list , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000342 Genomic DNA. Translation: EEE92469.1.
RefSeqXP_002308946.1. XM_002308910.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0006s04960.1; POPTR_0006s04960.1; POPTR_0006s04960.
GeneID7496135.
KEGGpop:POPTR_819059.

Phylogenomic databases

eggNOGCOG1429.
HOGENOMHOG000152424.
KOK03403.
OMAELQEMYL.
ProtClustDBPLN03069.

Family and domain databases

InterProIPR011771. BchH.
IPR003672. CobN/Mg_chltase.
IPR022571. Mg_chelatase_H_N.
[Graphical view]
PfamPF02514. CobN-Mg_chel. 2 hits.
PF11965. DUF3479. 1 hit.
[Graphical view]
TIGRFAMsTIGR02025. BchH. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9H9U7_POPTR
AccessionPrimary (citable) accession number: B9H9U7
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: April 16, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)