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B9H5X6 (B9H5X6_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE94823.1
Gene names
ORF Names:POPTRDRAFT_831727 EMBL EEE94823.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length383 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processmitotic spindle assembly checkpoint

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentchromocenter

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

kinetochore

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9H5X6 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 48F3FD6BDE24A0C3

FASTA38344,127
        10         20         30         40         50         60 
MEMEKLDAET EFLATKQETG NEWELFKENV RPLKRGRNVG LLNQALKSHT DYQLKKSLLD 

        70         80         90        100        110        120 
TRRKLIEAID EYKGDDPLFP WIQCIKWVQE AFPPGGDCSG LILIYEQCVR AFWHSDRYKD 

       130        140        150        160        170        180 
DLRYLKVWLE YAENCADAEV IYNFLEANEI GKSHSAYYLA YALHMESKSK MKIANDIFNL 

       190        200        210        220        230        240 
GISRDAQPVE KLKDAYRKFL IRSMRKPNVV EDDSGESHLP VRSFGTVLST ADNRRQNMER 

       250        260        270        280        290        300 
SELARKQMKP DRTQKIPLSI FKDTTSIDTM PGHQSGKSKT DLSPWSTLGA REERDKENSA 

       310        320        330        340        350        360 
LPTKWTTYKI PRRPGARTGG VTASASIEVF VDEECTEMDR SHDHDGKSST LKLRQGDGLD 

       370        380 
IKKETDLLRE NPLRNFPLRS LPR

« Hide

References

« Hide 'large scale' references
[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.
[2]US DOE Joint Genome Institute (JGI-PGF)
Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. expand/collapse author list , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000341 Genomic DNA. Translation: EEE94823.1.
RefSeqXP_002307827.1. XM_002307791.1.
UniGenePth.11503.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0005s27970.1; POPTR_0005s27970.1; POPTR_0005s27970.
GeneID7494734.
KEGGpop:POPTR_831727.

Phylogenomic databases

eggNOGNOG320292.
HOGENOMHOG000238865.
KOK02178.
OMAVIYEQCV.
ProtClustDBCLSN2688663.

Family and domain databases

InterProIPR015661. Bub1/Mad3.
IPR013212. Mad3_BUB1_I.
[Graphical view]
PANTHERPTHR14030. PTHR14030. 1 hit.
PfamPF08311. Mad3_BUB1_I. 1 hit.
[Graphical view]
SMARTSM00777. Mad3_BUB1_I. 1 hit.
[Graphical view]
PROSITEPS51489. BUB1_N. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9H5X6_POPTR
AccessionPrimary (citable) accession number: B9H5X6
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info