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Protein

Plastocyanin

Gene

POPTR_0005s26740g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processElectron transportUniRule annotation, Transport
LigandCopperUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
PlastocyaninUniRule annotation
Gene namesi
ORF Names:POPTR_0005s26740gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componenti: Linkage group LGV

Subcellular locationi

  • Plastidchloroplast thylakoid membrane UniRule annotation; Peripheral membrane protein UniRule annotation; Lumenal side UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

MembraneUniRule annotation, ThylakoidUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0005s26740.1.

Structurei

3D structure databases

ProteinModelPortaliB9H5C6.
SMRiB9H5C6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini71 – 168Copper-bindInterPro annotationAdd BLAST98

Sequence similaritiesi

Belongs to the plastocyanin family.UniRule annotation

Phylogenomic databases

eggNOGiENOG410IY43. Eukaryota.
COG3794. LUCA.
HOGENOMiHOG000209447.
InParanoidiB9H5C6.
KOiK02638.
OMAiNHEEYAN.
OrthoDBiEOG09360R7Y.

Family and domain databases

CDDicd04219. Plastocyanin. 1 hit.
Gene3Di2.60.40.420. 1 hit.
InterProiView protein in InterPro
IPR000923. BlueCu_1.
IPR028871. BlueCu_1_BS.
IPR001235. Copper_blue_Plastocyanin.
IPR008972. Cupredoxin.
IPR002387. Plastocyanin.
PfamiView protein in Pfam
PF00127. Copper-bind. 1 hit.
PRINTSiPR00156. COPPERBLUE.
PR00157. PLASTOCYANIN.
SUPFAMiSSF49503. SSF49503. 1 hit.
TIGRFAMsiTIGR02656. cyanin_plasto. 1 hit.
PROSITEiView protein in PROSITE
PS00196. COPPER_BLUE. 1 hit.

Sequencei

Sequence statusi: Complete.

B9H5C6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATVTSAAVS IPSFTGLKAG SASNAKVSAS AKVSASPLPR LSIKASMKDV
60 70 80 90 100
GAAVVATAAS AMIASNAMAI DVLLGADDGS LAFVPSEFSI SPGEKIVFKN
110 120 130 140 150
NAGFPHNIVF DEDSIPSGVD ASKISMSEED LLNAKGETFE VALSNKGEYS
160
FYCSPHQGAG MVGKVTVN
Length:168
Mass (Da):17,020
Last modified:March 24, 2009 - v1
Checksum:i901B21A7573DBF82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000341 Genomic DNA. Translation: EEE94750.1.
RefSeqiXP_002307754.1. XM_002307718.2.

Genome annotation databases

EnsemblPlantsiPOPTR_0005s26740.1; POPTR_0005s26740.1; POPTR_0005s26740.
GeneIDi7485623.
GrameneiPOPTR_0005s26740.1; POPTR_0005s26740.1; POPTR_0005s26740.
KEGGipop:POPTR_0005s26740g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000341 Genomic DNA. Translation: EEE94750.1.
RefSeqiXP_002307754.1. XM_002307718.2.

3D structure databases

ProteinModelPortaliB9H5C6.
SMRiB9H5C6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.POPTR_0005s26740.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPOPTR_0005s26740.1; POPTR_0005s26740.1; POPTR_0005s26740.
GeneIDi7485623.
GrameneiPOPTR_0005s26740.1; POPTR_0005s26740.1; POPTR_0005s26740.
KEGGipop:POPTR_0005s26740g.

Phylogenomic databases

eggNOGiENOG410IY43. Eukaryota.
COG3794. LUCA.
HOGENOMiHOG000209447.
InParanoidiB9H5C6.
KOiK02638.
OMAiNHEEYAN.
OrthoDBiEOG09360R7Y.

Family and domain databases

CDDicd04219. Plastocyanin. 1 hit.
Gene3Di2.60.40.420. 1 hit.
InterProiView protein in InterPro
IPR000923. BlueCu_1.
IPR028871. BlueCu_1_BS.
IPR001235. Copper_blue_Plastocyanin.
IPR008972. Cupredoxin.
IPR002387. Plastocyanin.
PfamiView protein in Pfam
PF00127. Copper-bind. 1 hit.
PRINTSiPR00156. COPPERBLUE.
PR00157. PLASTOCYANIN.
SUPFAMiSSF49503. SSF49503. 1 hit.
TIGRFAMsiTIGR02656. cyanin_plasto. 1 hit.
PROSITEiView protein in PROSITE
PS00196. COPPER_BLUE. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB9H5C6_POPTR
AccessioniPrimary (citable) accession number: B9H5C6
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: February 15, 2017
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.