B9H405 (B9H405_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE86512.1

Gene names

ORF Names:

POPTRDRAFT_831216 EMBL EEE86512.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	631 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9H405 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: B2A8B934381A3ADD	FASTA	631	70,804
	10 20 30 40 50 60 MSKSLPYSMK DVHYDNAKFR QRSFVKVITQ SLLTSNAKHD CLSCSTGKFL ALLMIFGLAC 70 80 90 100 110 120 LMFTHKSTPH SVSQGQAEGI KVNKEVKGIS DSGGRFQRFW RKPPRLPPQL PPDEKGSIGN 130 140 150 160 170 180 LPHELQKLNT DSKWVDRQQR VQKAFIHAWS GYKMYAMGYD ELMPLSQRGV DGLGGLGATV 190 200 210 220 230 240 VDALDTALIM GVDEVVSEAG LWIETHLSDR ISKKGQVNLF ETTIRVLGGL LSAYHLSGGE 250 260 270 280 290 300 QGTNLTHKGP KPTVYLETAR NLADRLLLAF TSSPTSIPFS DVVLHDPSAH RAPDGLSSTA 310 320 330 340 350 360 EVSTVQLEFN YLSTVSGDPR YSIEAMKVLE HIKDLPKVEG LVPIYISPDS GEFSGENIRL 370 380 390 400 410 420 GSRGDSYYEY LIKVWLQQGR NRDSNFTYLY DMYEEAMKGV RHLLVQKSIP NGLVFVGELP 430 440 450 460 470 480 YGPKGSFSPK MDHLVCFLPG TLALGATKGL TKEKAMKENL LKFEDLENLK LAEDLAKTCF 490 500 510 520 530 540 EMYSVTSTGL APEIAYFHTE EYSEHGLDGG NKNSKFVNDI IIKHADRHNL LRPETVESLF 550 560 570 580 590 600 ILYRITEDPK YQEWGWQIFE AFEKYTKVDS GGYSSLEDVT VLPPRRRDKM ETFFLGETLK 610 620 630 YFYLLFGDRS VIPLDKYVFN TEAHPLPIKG S

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000340 Genomic DNA. Translation: EEE86512.1.
RefSeq	XP_002306001.1. XM_002305965.1.
3D structure databases
ProteinModelPortal	B9H405.
ModBase	Search...
Protein-protein interaction databases
STRING	B9H405.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7472574.
KEGG	pop:POPTR_831216.
Phylogenomic databases
GeneTree	EPGT00070000030134.
OMA	AWGHDNL.
ProtClustDB	CLSN2917102.
Family and domain databases
InterPro	IPR001382. Glyco_hydro_47. [Graphical view]
Gene3D	G3DSA:1.50.10.50. Glyco_hydro_47. 1 hit.
KO	K01230.
PANTHER	PTHR11742. Glyco_hydro_47. 1 hit.
Pfam	PF01532. Glyco_hydro_47. 1 hit. [Graphical view]
PRINTS	PR00747. GLYHDRLASE47.
SUPFAM	SSF48225. Glyco_hydro_47. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9H405_POPTR

Accession

Primary (citable) accession number: B9H405

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)