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B9H3Y7 (B9H3Y7_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE85840.1
Gene names
ORF Names:POPTRDRAFT_556242 EMBL EEE85840.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length428 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular functionacetylglucosaminyltransferase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9H3Y7 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 93A5C2F3E01E6922

FASTA42848,937
        10         20         30         40         50         60 
MKRLKSYYMH LRHHQNMERK WIFPLAIGSL VSLFLLFLTT ITTSDGISVF PFYRSFSSLS 

        70         80         90        100        110        120 
SKFVETKIHP LPISNLPPPP RFAYVISGSA GDANMLKRTL QALYHPNNQY VVHLDRESST 

       130        140        150        160        170        180 
QERLDLSNFV KHHPVFLRFG NVRMISKANL VTYRGPTMVA NTLHAAAILL REGGDWDWFI 

       190        200        210        220        230        240 
NLSASDYPLV TQDDLLHTFS YLPRDLNFID HTSDIGWKEF QRAKPIIIDP GLYMTKKADV 

       250        260        270        280        290        300 
FWITQRRSVP TAFKLFTGSA WMALSRPFID YTIWGWDNIP RTVLMYYANF ISSPEGYFHT 

       310        320        330        340        350        360 
VICNSPQFLN TTVNSDLHFI SWDNPPKQHP HHLNLADMQR MIESNAPFAR KFPHEDPVLD 

       370        380        390        400        410        420 
KIDSELLSRG PGMFTPGGWC IGSRENGTDP CSAIGNTTVL RPGPGAKRLQ SLISSLLSNE 


NFQPRQCK

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000340 Genomic DNA. Translation: EEE85840.1.
RefSeqXP_002305329.1. XM_002305293.1.
UniGenePth.4801.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0004s13530.1; POPTR_0004s13530.1; POPTR_0004s13530.
GeneID7494077.
KEGGpop:POPTR_556242.

Phylogenomic databases

GeneTreeEPGT00050000008770.
OMASSERKWI.
PhylomeDBB9H3Y7.
ProtClustDBCLSN2687434.

Family and domain databases

InterProIPR003406. Glyco_trans_14.
[Graphical view]
PfamPF02485. Branch. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9H3Y7_POPTR
AccessionPrimary (citable) accession number: B9H3Y7
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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