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Protein

Glutamate decarboxylase

Gene

POPTR_0004s07350g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDecarboxylaseUniRule annotation, Lyase
LigandPyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:POPTR_0004s07350gImported, POPTR_004G075200v3Imported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componentsi: Chromosome 4, Linkage group LGIV

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei277N6-(pyridoxal phosphate)lysineUniRule annotation1

Expressioni

Gene expression databases

ExpressionAtlasiB9H3K1 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0004s07350.1

Structurei

3D structure databases

ProteinModelPortaliB9H3K1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1383 Eukaryota
COG0076 LUCA
HOGENOMiHOG000070228
InParanoidiB9H3K1
KOiK01580
OMAiNLREDYY
OrthoDBiEOG093607ZR

Family and domain databases

Gene3Di3.40.640.10, 1 hit
InterProiView protein in InterPro
IPR010107 Glutamate_decarboxylase
IPR002129 PyrdxlP-dep_de-COase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
PANTHERiPTHR43321 PTHR43321, 1 hit
PfamiView protein in Pfam
PF00282 Pyridoxal_deC, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR01788 Glu-decarb-GAD, 1 hit

Sequencei

Sequence statusi: Complete.

B9H3K1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLSKTASES DVSVHSTFAS RYVRASLPRF KMPENSIPKE AAFQIINDEL
60 70 80 90 100
MLDGNPRLNL ASFVTTWMEP ECDKLIMASI NKNYVDMDEY PVTTELQNRC
110 120 130 140 150
VNMIAHLFNA PLGDSETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK
160 170 180 190 200
PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSDGYYVM DPEKAVQMVD
210 220 230 240 250
ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKSTGWDTP IHVDAASGGF
260 270 280 290 300
IAPFIYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
310 320 330 340 350
IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGYEGY RNVMENCRDN
360 370 380 390 400
MLVLKQGLEK TGKFNIVSKD NGVPLVAFSL KDNSLHNEFE VSDMLRRFGW
410 420 430 440 450
IVPAYTMPPD AQHVTVLRVV IREDFSRTLA ERLVIDIGKV LHELETLPSR
460 470 480 490
ISAKIVLANE EKDAVADKDK KDVQKETREI ITAWRKLVIQ RKKMNGVC
Length:498
Mass (Da):56,336
Last modified:March 24, 2009 - v1
Checksum:i3E713D6B999EC789
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000340 Genomic DNA Translation: EEE86438.1
CM009293 Genomic DNA Translation: PNT40055.1
RefSeqiXP_002305927.1, XM_002305891.2

Genome annotation databases

EnsemblPlantsiPOPTR_0004s07350.1; POPTR_0004s07350.1; POPTR_0004s07350
GeneIDi7494518
GrameneiPOPTR_0004s07350.1; POPTR_0004s07350.1; POPTR_0004s07350
KEGGipop:POPTR_0004s07350g

Similar proteinsi

Entry informationi

Entry nameiB9H3K1_POPTR
AccessioniPrimary (citable) accession number: B9H3K1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 23, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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