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B9GXU3 (B9GXU3_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE78653.1
Gene names
ORF Names:POPTRDRAFT_817432 EMBL EEE78653.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length568 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionalpha,alpha-trehalase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9GXU3 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 70F63C1D23F462C6

FASTA56864,216
        10         20         30         40         50         60 
MSLTTSLSPN CSGTDTVVAT TPLVTFLVRV QETALGTFGE EDFDPKLYVD LSLKFNLSKT 

        70         80         90        100        110        120 
QKAFDELPRS GENGTVSVED LKVFIATYFD DAADDLVYYD PVDFVPEPEG FLPKVKNPEV 

       130        140        150        160        170        180 
RSWALEVHAL WKNLSRKVSD GVLEHSELHT LLPLPEAVVV PGSRFREVYY WDSYWVIRGL 

       190        200        210        220        230        240 
MASKMYETAK AIVTNLIFLV DTYGYVLNGA RAYYTNRSQP PLLSAMVYEI YNRTCDVELV 

       250        260        270        280        290        300 
RKALPALLKE HAFWNSEIHK VTIQDAQGCN HNLSRYYAMW NKPRPERSRK DKEAASKFLG 

       310        320        330        340        350        360 
NSEKQQFYRD VASAAESGWD FSTRWMRNTS EFSTMSTTSI LPVDLNVYIL KMELDIAFFA 

       370        380        390        400        410        420 
NVLGNKSTVE SFLEAAEARK NAINSVFWND EMGQWLDYRL TNGTICKESE TWQACNQNQN 

       430        440        450        460        470        480 
AYASNFIPLW IDLFHADAAL VENVMRSFQS SGLVHAAGIA TSLINSGHQW DFPNGWAPLQ 

       490        500        510        520        530        540 
HMIVEGLLRS GLKEARSLAE DIAVRWIKTN YVGYKKTGAM HEKYNVQKCG EFGGGGFYKP 

       550        560 
QTGFGWSNGV VLTFLEEFGW PEDLSIGC

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000339 Genomic DNA. Translation: EEE78653.1.
RefSeqXP_002303674.1. XM_002303638.1.
UniGenePth.7793.

3D structure databases

ProteinModelPortalB9GXU3.
ModBaseSearch...

Protein-protein interaction databases

STRINGB9GXU3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7497872.
KEGGpop:POPTR_817432.

Phylogenomic databases

GeneTreeEPGT00050000013436.
OMAFWMDGAD.
ProtClustDBPLN02567.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR001661. Glyco_hydro_37.
IPR018232. Glyco_hydro_37_CS.
[Graphical view]
KOK01194.
PANTHERPTHR23403. Glyco_hydro_37. 1 hit.
PfamPF01204. Trehalase. 1 hit.
[Graphical view]
PRINTSPR00744. GLHYDRLASE37.
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
PROSITEPS00928. TREHALASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GXU3_POPTR
AccessionPrimary (citable) accession number: B9GXU3
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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