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B9GWU6 (B9GWU6_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE79494.1
Gene names
ORF Names:POPTRDRAFT_554403 EMBL EEE79494.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length517 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B9GWU6 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 547CFFC46B67A2C9

FASTA51759,614
        10         20         30         40         50         60 
MKLNAQKDPE KIIWDQMRSP STNPISGPQR TLPKLMIWLI LLVSVSYVVY TLKLVSTSRA 

        70         80         90        100        110        120 
CNDEPFTTNR HLSAISHNNS LPLIQNHTSL AIHRRENHEP RQETGLQHIV FGIAASAKLW 

       130        140        150        160        170        180 
EQRQNYIKIW FKPQEMRGIV WLDDKVKNQG REDNNLPPIK ISSDTSRFSY TNKQGHRSAI 

       190        200        210        220        230        240 
RISRIVSETL RLGLKNVRWF VMGDDDTVFI AENLVRILRK YDHNQYYYIG SLSESHLQNI 

       250        260        270        280        290        300 
YFSYGMAYGG GGFAVSYPLA KALDKMQDRC IQRYPGLYGS DDRMQACMAE LGVPLTKEVG 

       310        320        330        340        350        360 
FHQYDVYGNL FGLLAAHPVT PLVSLHHLDV VEPIFPNATR VQALRWLTVP MKLDSAGLMQ 

       370        380        390        400        410        420 
QSICYDKSKR WTVSVSWGFA VQIFRGVFSP REIEMPSRTF LNWYRKADYT AYAFNTRPVS 

       430        440        450        460        470        480 
RNPCQKPFVF YLSKVKFDSS LNTTVSEYSR HYVPHPACKW KMADPDKIET IVVHKKPDPH 

       490        500        510 
LWDRSPRRNC CRVMNSKKKG SVMINVGVCR DDEISEV

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000339 Genomic DNA. Translation: EEE79494.1.
RefSeqXP_002304515.1. XM_002304479.1.
UniGenePth.5229.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0003s13130.1; POPTR_0003s13130.1; POPTR_0003s13130.
GeneID7497133.
KEGGpop:POPTR_554403.

Phylogenomic databases

GeneTreeEPGT00050000000455.
OMAMEMPART.
PhylomeDBB9GWU6.
ProtClustDBCLSN2686370.

Family and domain databases

InterProIPR006740. DUF604.
[Graphical view]
PfamPF04646. DUF604. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GWU6_POPTR
AccessionPrimary (citable) accession number: B9GWU6
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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