B9GWS1 (B9GWS1_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE79479.1

Gene names

ORF Names:

POPTRDRAFT_1074034 EMBL EEE79479.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	534 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	GMP biosynthetic process Inferred from electronic annotation. Source: InterPro asparagine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro GMP synthase (glutamine-hydrolyzing) activity Inferred from electronic annotation. Source: InterPro asparagine synthase (glutamine-hydrolyzing) activity Inferred from electronic annotation. Source: InterPro pyrophosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9GWS1 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 37F35E818E324168	FASTA	534	59,375
	10 20 30 40 50 60 MDPKAVKSDL VLILDYGSQY THLITRRIRS LNIFSLCISG TSSLETITSH NPKVVILSGG 70 80 90 100 110 120 PHSVHSANSP TFPSGFVEWA QKGGIFVLGV CYGLQLIVQR LGGQVDVGQR QEYGRMEIEV 130 140 150 160 170 180 EKNLGVFGNK KVGDKQVVWM SHGDETVKLP YGFEVVARSQ QGAVAAVENR EMRFFGLQYH 190 200 210 220 230 240 PEVTHSPEGM DTLRYFLFDV CGVSPGWNME NVLDEEIRVI NDAVGPEEHV ICALSGGVDS 250 260 270 280 290 300 TVAATLVHKA IGDRLHCIFV DNGLLRYKER ERVAETFESD LHLPVTCVDA SNEFLSKLKG 310 320 330 340 350 360 VVDPEMKRKI IGKEFISIFD AFAHELEQKL GKKPAYLVQG TLYPDVIESC PPPGSGRTHS 370 380 390 400 410 420 HTIKSHHNVG GLPKDMKLKL IEPLKLLFKD EVRQLGRILN VPDAFLKRHP FPGPGLAVRV 430 440 450 460 470 480 LGDVTEGNAL DILRQVDEIF IQSIKDAGLY DSIWQAFAVF LPVRSVGVQG DQRTHSHVVA 490 500 510 520 530 LRAVTSQDGM TADWYYFEHK FLDDVARKIC NSVRGVNRVV QDITSKPPST IEWE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000339 Genomic DNA. Translation: EEE79479.1.
RefSeq	XP_002304500.1. XM_002304464.1.
UniGene	Pth.7231.
3D structure databases
ProteinModelPortal	B9GWS1.
ModBase	Search...
Protein-protein interaction databases
STRING	3694.gw1.III.614.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	POPTR_0003s12830.1; POPTR_0003s12830.1; POPTR_0003s12830.
GeneID	7458178.
KEGG	pop:POPTR_1074034.
Phylogenomic databases
eggNOG	COG0519.
HOGENOM	HOG000223964.
KO	K01951.
OMA	YDYVVAL.
ProtClustDB	PLN02347.
Family and domain databases
Gene3D	3.40.50.620. 1 hit.
HAMAP	MF_00344. GMP_synthase.
InterPro	IPR001962. Asn_synthase. IPR017926. GATASE_1. IPR001674. GMP_synth_C. IPR004739. GMP_synth_N. IPR022955. GMP_synthase. IPR025777. GMPS_ATP_PPase_dom. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view]
Pfam	PF00733. Asn_synthase. 1 hit. PF00117. GATase. 1 hit. PF00958. GMP_synt_C. 1 hit. [Graphical view]
TIGRFAMs	TIGR00884. guaA_Cterm. 1 hit. TIGR00888. guaA_Nterm. 1 hit.
PROSITE	PS51273. GATASE_TYPE_1. 1 hit. PS51553. GMPS_ATP_PPASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9GWS1_POPTR

Accession

Primary (citable) accession number: B9GWS1

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	April 3, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)