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Protein
Submitted name:

Uncharacterized protein

Gene

POPTR_0003s12830g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. asparagine synthase (glutamine-hydrolyzing) activity Source: EnsemblPlants/Gramene
  2. ATP binding Source: EnsemblPlants/Gramene
  3. GMP synthase (glutamine-hydrolyzing) activity Source: EnsemblPlants/Gramene
  4. pyrophosphatase activity Source: EnsemblPlants/Gramene
  5. transferase activity Source: EnsemblPlants/Gramene

GO - Biological processi

  1. asparagine biosynthetic process Source: EnsemblPlants/Gramene
  2. glutamine metabolic process Source: EnsemblPlants/Gramene
  3. GMP biosynthetic process Source: EnsemblPlants/Gramene
  4. protein import into nucleus Source: EnsemblPlants/Gramene
  5. pyrimidine ribonucleotide biosynthetic process Source: EnsemblPlants/Gramene
  6. RNA methylation Source: EnsemblPlants/Gramene
Complete GO annotation...

Protein family/group databases

MEROPSiC26.A07.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:POPTR_0003s12830gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
ProteomesiUP000006729 Componenti: Linkage group LGIII

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3694.gw1.III.614.1.

Structurei

3D structure databases

ProteinModelPortaliB9GWS1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0519.
HOGENOMiHOG000223964.
InParanoidiB9GWS1.
KOiK01951.
OMAiKNAKWLA.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
3.40.50.880. 1 hit.
HAMAPiMF_00344. GMP_synthase.
InterProiIPR001962. Asn_synthase.
IPR029062. Class_I_gatase-like.
IPR017926. GATASE.
IPR001674. GMP_synth_C.
IPR004739. GMP_synth_N.
IPR022955. GMP_synthase.
IPR025777. GMPS_ATP_PPase_dom.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF00733. Asn_synthase. 1 hit.
PF00117. GATase. 1 hit.
PF00958. GMP_synt_C. 1 hit.
[Graphical view]
SUPFAMiSSF52317. SSF52317. 1 hit.
TIGRFAMsiTIGR00884. guaA_Cterm. 1 hit.
TIGR00888. guaA_Nterm. 1 hit.
PROSITEiPS51273. GATASE_TYPE_1. 1 hit.
PS51553. GMPS_ATP_PPASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9GWS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPKAVKSDL VLILDYGSQY THLITRRIRS LNIFSLCISG TSSLETITSH
60 70 80 90 100
NPKVVILSGG PHSVHSANSP TFPSGFVEWA QKGGIFVLGV CYGLQLIVQR
110 120 130 140 150
LGGQVDVGQR QEYGRMEIEV EKNLGVFGNK KVGDKQVVWM SHGDETVKLP
160 170 180 190 200
YGFEVVARSQ QGAVAAVENR EMRFFGLQYH PEVTHSPEGM DTLRYFLFDV
210 220 230 240 250
CGVSPGWNME NVLDEEIRVI NDAVGPEEHV ICALSGGVDS TVAATLVHKA
260 270 280 290 300
IGDRLHCIFV DNGLLRYKER ERVAETFESD LHLPVTCVDA SNEFLSKLKG
310 320 330 340 350
VVDPEMKRKI IGKEFISIFD AFAHELEQKL GKKPAYLVQG TLYPDVIESC
360 370 380 390 400
PPPGSGRTHS HTIKSHHNVG GLPKDMKLKL IEPLKLLFKD EVRQLGRILN
410 420 430 440 450
VPDAFLKRHP FPGPGLAVRV LGDVTEGNAL DILRQVDEIF IQSIKDAGLY
460 470 480 490 500
DSIWQAFAVF LPVRSVGVQG DQRTHSHVVA LRAVTSQDGM TADWYYFEHK
510 520 530
FLDDVARKIC NSVRGVNRVV QDITSKPPST IEWE
Length:534
Mass (Da):59,375
Last modified:March 23, 2009 - v1
Checksum:i37F35E818E324168
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000339 Genomic DNA. Translation: EEE79479.1.
RefSeqiXP_002304500.1. XM_002304464.2.

Genome annotation databases

EnsemblPlantsiPOPTR_0003s12830.1; POPTR_0003s12830.1; POPTR_0003s12830.
GeneIDi7458178.
KEGGipop:POPTR_0003s12830g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000339 Genomic DNA. Translation: EEE79479.1.
RefSeqiXP_002304500.1. XM_002304464.2.

3D structure databases

ProteinModelPortaliB9GWS1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.gw1.III.614.1.

Protein family/group databases

MEROPSiC26.A07.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPOPTR_0003s12830.1; POPTR_0003s12830.1; POPTR_0003s12830.
GeneIDi7458178.
KEGGipop:POPTR_0003s12830g.

Phylogenomic databases

eggNOGiCOG0519.
HOGENOMiHOG000223964.
InParanoidiB9GWS1.
KOiK01951.
OMAiKNAKWLA.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
3.40.50.880. 1 hit.
HAMAPiMF_00344. GMP_synthase.
InterProiIPR001962. Asn_synthase.
IPR029062. Class_I_gatase-like.
IPR017926. GATASE.
IPR001674. GMP_synth_C.
IPR004739. GMP_synth_N.
IPR022955. GMP_synthase.
IPR025777. GMPS_ATP_PPase_dom.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF00733. Asn_synthase. 1 hit.
PF00117. GATase. 1 hit.
PF00958. GMP_synt_C. 1 hit.
[Graphical view]
SUPFAMiSSF52317. SSF52317. 1 hit.
TIGRFAMsiTIGR00884. guaA_Cterm. 1 hit.
TIGR00888. guaA_Nterm. 1 hit.
PROSITEiPS51273. GATASE_TYPE_1. 1 hit.
PS51553. GMPS_ATP_PPASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
    Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A.
    , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
    Science 313:1596-1604(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NisquallyImported.

Entry informationi

Entry nameiB9GWS1_POPTR
AccessioniPrimary (citable) accession number: B9GWS1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 23, 2009
Last sequence update: March 23, 2009
Last modified: January 6, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.