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B9GWS1 (B9GWS1_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length534 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
B9GWS1 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 37F35E818E324168

FASTA53459,375
        10         20         30         40         50         60 
MDPKAVKSDL VLILDYGSQY THLITRRIRS LNIFSLCISG TSSLETITSH NPKVVILSGG 

        70         80         90        100        110        120 
PHSVHSANSP TFPSGFVEWA QKGGIFVLGV CYGLQLIVQR LGGQVDVGQR QEYGRMEIEV 

       130        140        150        160        170        180 
EKNLGVFGNK KVGDKQVVWM SHGDETVKLP YGFEVVARSQ QGAVAAVENR EMRFFGLQYH 

       190        200        210        220        230        240 
PEVTHSPEGM DTLRYFLFDV CGVSPGWNME NVLDEEIRVI NDAVGPEEHV ICALSGGVDS 

       250        260        270        280        290        300 
TVAATLVHKA IGDRLHCIFV DNGLLRYKER ERVAETFESD LHLPVTCVDA SNEFLSKLKG 

       310        320        330        340        350        360 
VVDPEMKRKI IGKEFISIFD AFAHELEQKL GKKPAYLVQG TLYPDVIESC PPPGSGRTHS 

       370        380        390        400        410        420 
HTIKSHHNVG GLPKDMKLKL IEPLKLLFKD EVRQLGRILN VPDAFLKRHP FPGPGLAVRV 

       430        440        450        460        470        480 
LGDVTEGNAL DILRQVDEIF IQSIKDAGLY DSIWQAFAVF LPVRSVGVQG DQRTHSHVVA 

       490        500        510        520        530 
LRAVTSQDGM TADWYYFEHK FLDDVARKIC NSVRGVNRVV QDITSKPPST IEWE 

« Hide

References

« Hide 'large scale' references
[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.
[2]US DOE Joint Genome Institute (JGI-PGF)
Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. expand/collapse author list , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000339 Genomic DNA. Translation: EEE79479.1.
RefSeqXP_002304500.1. XM_002304464.2.

3D structure databases

ProteinModelPortalB9GWS1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3694.gw1.III.614.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0003s12830.1; POPTR_0003s12830.1; POPTR_0003s12830.
GeneID7458178.
KEGGpop:POPTR_0003s12830g.

Phylogenomic databases

eggNOGCOG0519.
HOGENOMHOG000223964.
KOK01951.
OMAIEPFRYL.

Family and domain databases

Gene3D3.40.50.620. 1 hit.
3.40.50.880. 1 hit.
HAMAPMF_00344. GMP_synthase.
InterProIPR001962. Asn_synthase.
IPR029062. Class_I_gatase-like.
IPR017926. GATASE.
IPR001674. GMP_synth_C.
IPR004739. GMP_synth_N.
IPR022955. GMP_synthase.
IPR025777. GMPS_ATP_PPase_dom.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamPF00733. Asn_synthase. 1 hit.
PF00117. GATase. 1 hit.
PF00958. GMP_synt_C. 1 hit.
[Graphical view]
SUPFAMSSF52317. SSF52317. 1 hit.
TIGRFAMsTIGR00884. guaA_Cterm. 1 hit.
TIGR00888. guaA_Nterm. 1 hit.
PROSITEPS51273. GATASE_TYPE_1. 1 hit.
PS51553. GMPS_ATP_PPASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GWS1_POPTR
AccessionPrimary (citable) accession number: B9GWS1
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: June 11, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)