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B9GTC2 (B9GTC2_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length995 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

tricarboxylic acid cycle

Inferred from electronic annotation. Source: InterPro

   Cellular_componentapoplast

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

cytosol

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

plasma membrane

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

plasmodesma

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionphosphoenolpyruvate carboxylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9GTC2 [UniParc].

Last modified December 11, 2013. Version 2.
Checksum: 5FF8BC982AC8717C

FASTA995113,839
        10         20         30         40         50         60 
MNMKRKEQAK PRTEYICLFV YSRREGRRKA MADRNLQKMA SIDAQLRLLA PGKVSEDDKL 

        70         80         90        100        110        120 
VEYDALLLDR FLDILQDLHG KDIRETVHDC YELSAEYEAK HDPQKLEELG RVITSLDPGD 

       130        140        150        160        170        180 
SIVVTKSFSH MLNLANLAEE VQIASRRRIK LKKGDFADEN SATTESDIEE TLNRLVGQLN 

       190        200        210        220        230        240 
KSPEEVFEAL KNQTVDLVLT AHPTQSVRRS LLQKHARIRN CLTQLYAKDI TPYDKQELDE 

       250        260        270        280        290        300 
ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRLDT ALKNIGIKER 

       310        320        330        340        350        360 
VPYNAPVIQF SSWMGGDRDG NPRVTPEVTR DVCLLARMMA ANLYFSQIED LMFELSMWRC 

       370        380        390        400        410        420 
NEELRVRADE LHSSSKRYAK HYIEFWKQIP PNEPYRVVLG NVRDKLYNTR ERSRQLLANG 

       430        440        450        460        470        480 
KSDIPEDSTF TNAEQILEPL ELCYRSLCAC GDRPIADGSL LDFLRQVSTF GLSLVRLDIR 

       490        500        510        520        530        540 
QESDRHTAVL DAITKHLGIG SYREWSEEHR REWLLSELRG KRPLFGPDLP KTEEIADVLD 

       550        560        570        580        590        600 
TFHVIAELPP DNFGAYIISM ATSPSDVLAV ELLQRECHVQ QSLRVVPLFE KLADLEAAPA 

       610        620        630        640        650        660 
AMACLFSINW YRDRIKGKQE VMIGYSDSGK DAGRLSAAWQ LYKAQEELVK VAKQYGVKLT 

       670        680        690        700        710        720 
MFHGRGGTVG RGGGPTHLAI LSQPPDTIHG SLRVTVQGEV IEKSFGEEHL CFRTLQRFTA 

       730        740        750        760        770        780 
ATLEHGMHPP VSPKSEWRAL MDEMAIVATK EYRSIVFQEP RFVEYFRLAT PELEYGRMNI 

       790        800        810        820        830        840 
GSRPSKRKPS GGIESLRAIP WIFAWTQTRF HLPVWLGFGA AFKHVIQKDT KNLHTLQEMY 

       850        860        870        880        890        900 
NQWPFFRVTI DLVEMVFAKG GPGIAALYDK LLVSEELRPF GDRLRANYEE NKLFLLQIAG 

       910        920        930        940        950        960 
HKDLLEGDPY LKQRLRLRDA YITTLNVCQA YTLKQIRDPD YHVTVRPHLS KDYMESTKPA 

       970        980        990 
AELVKLNPTS EYAPGLEDTL ILTMKGIAAG LQNTG 

« Hide

References

« Hide 'large scale' references
[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.
[2]US DOE Joint Genome Institute (JGI-PGF)
Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. expand/collapse author list , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000338 Genomic DNA. Translation: EEE82093.2.
RefSeqXP_002302820.2. XM_002302784.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3694.eugene3.00001960.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7458241.
KEGGpop:POPTR_552645.

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238648.
KOK01595.
ProtClustDBCLSN2679806.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 2 hits.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GTC2_POPTR
AccessionPrimary (citable) accession number: B9GTC2
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: December 11, 2013
Last modified: April 16, 2014
This is version 33 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)