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B9GTC2

- B9GTC2_POPTR

UniProt

B9GTC2 - B9GTC2_POPTR

Protein
Submitted name:

Uncharacterized protein

Gene

POPTR_0002s22720g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 2 (11 Dec 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphoenolpyruvate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro
    2. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    ORF Names:POPTR_0002s22720gImported
    OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
    Taxonomic identifieri3694 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
    ProteomesiUP000006729: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: EnsemblPlants/Gramene
    2. chloroplast Source: EnsemblPlants/Gramene
    3. cytosol Source: EnsemblPlants/Gramene
    4. plasma membrane Source: EnsemblPlants/Gramene
    5. plasmodesma Source: EnsemblPlants/Gramene

    Interactioni

    Protein-protein interaction databases

    STRINGi3694.eugene3.00001960.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2352.
    HOGENOMiHOG000238648.
    KOiK01595.
    OMAiMLANIGE.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 2 hits.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9GTC2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNMKRKEQAK PRTEYICLFV YSRREGRRKA MADRNLQKMA SIDAQLRLLA    50
    PGKVSEDDKL VEYDALLLDR FLDILQDLHG KDIRETVHDC YELSAEYEAK 100
    HDPQKLEELG RVITSLDPGD SIVVTKSFSH MLNLANLAEE VQIASRRRIK 150
    LKKGDFADEN SATTESDIEE TLNRLVGQLN KSPEEVFEAL KNQTVDLVLT 200
    AHPTQSVRRS LLQKHARIRN CLTQLYAKDI TPYDKQELDE ALQREIQAAF 250
    RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRLDT ALKNIGIKER 300
    VPYNAPVIQF SSWMGGDRDG NPRVTPEVTR DVCLLARMMA ANLYFSQIED 350
    LMFELSMWRC NEELRVRADE LHSSSKRYAK HYIEFWKQIP PNEPYRVVLG 400
    NVRDKLYNTR ERSRQLLANG KSDIPEDSTF TNAEQILEPL ELCYRSLCAC 450
    GDRPIADGSL LDFLRQVSTF GLSLVRLDIR QESDRHTAVL DAITKHLGIG 500
    SYREWSEEHR REWLLSELRG KRPLFGPDLP KTEEIADVLD TFHVIAELPP 550
    DNFGAYIISM ATSPSDVLAV ELLQRECHVQ QSLRVVPLFE KLADLEAAPA 600
    AMACLFSINW YRDRIKGKQE VMIGYSDSGK DAGRLSAAWQ LYKAQEELVK 650
    VAKQYGVKLT MFHGRGGTVG RGGGPTHLAI LSQPPDTIHG SLRVTVQGEV 700
    IEKSFGEEHL CFRTLQRFTA ATLEHGMHPP VSPKSEWRAL MDEMAIVATK 750
    EYRSIVFQEP RFVEYFRLAT PELEYGRMNI GSRPSKRKPS GGIESLRAIP 800
    WIFAWTQTRF HLPVWLGFGA AFKHVIQKDT KNLHTLQEMY NQWPFFRVTI 850
    DLVEMVFAKG GPGIAALYDK LLVSEELRPF GDRLRANYEE NKLFLLQIAG 900
    HKDLLEGDPY LKQRLRLRDA YITTLNVCQA YTLKQIRDPD YHVTVRPHLS 950
    KDYMESTKPA AELVKLNPTS EYAPGLEDTL ILTMKGIAAG LQNTG 995
    Length:995
    Mass (Da):113,839
    Last modified:December 11, 2013 - v2
    Checksum:i5FF8BC982AC8717C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000338 Genomic DNA. Translation: EEE82093.2.
    RefSeqiXP_002302820.2. XM_002302784.2.

    Genome annotation databases

    GeneIDi7458241.
    KEGGipop:POPTR_0002s22720g.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000338 Genomic DNA. Translation: EEE82093.2 .
    RefSeqi XP_002302820.2. XM_002302784.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3694.eugene3.00001960.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7458241.
    KEGGi pop:POPTR_0002s22720g.

    Phylogenomic databases

    eggNOGi COG2352.
    HOGENOMi HOG000238648.
    KOi K01595.
    OMAi MLANIGE.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 2 hits.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
      Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A.
      , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
      Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. NisquallyImported.

    Entry informationi

    Entry nameiB9GTC2_POPTR
    AccessioniPrimary (citable) accession number: B9GTC2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: December 11, 2013
    Last modified: October 1, 2014
    This is version 37 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3