B9GTC2 (B9GTC2_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE82093.1

Gene names

ORF Names:

POPTRDRAFT_552645 EMBL EEE82093.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	965 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Cellular_component	apoplast Inferred from electronic annotation. Source: EnsemblPlants/Gramene chloroplast Inferred from electronic annotation. Source: EnsemblPlants/Gramene cytosol Inferred from electronic annotation. Source: EnsemblPlants/Gramene plasma membrane Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	phosphoenolpyruvate carboxylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9GTC2 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: E7C190EA592A30A1	FASTA	965	110,111
	10 20 30 40 50 60 MADRNLQKMA SIDAQLRLLA PGKVSEDDKL VEYDALLLDR FLDILQDLHG KDIRETVHDC 70 80 90 100 110 120 YELSAEYEAK HDPQKLEELG RVITSLDPGD SIVVTKSFSH MLNLANLAEE VQIASRRRIK 130 140 150 160 170 180 LKKGDFADEN SATTESDIEE TLNRLVGQLN KSPEEVFEAL KNQTVDLVLT AHPTQSVRRS 190 200 210 220 230 240 LLQKHARIRN CLTQLYAKDI TPYDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM 250 260 270 280 290 300 SYFHETIWKG VPKFLRRLDT ALKNIGIKER VPYNAPVIQF SSWMGGDRDG NPRVTPEVTR 310 320 330 340 350 360 DVCLLARMMA ANLYFSQIED LMFELSMWRC NEELRVRADE LHSSSKRYAK HYIEFWKQIP 370 380 390 400 410 420 PNEPYRVVLG NVRDKLYNTR ERSRQLLANG KSDIPEDSTF TNAEQILEPL ELCYRSLCAC 430 440 450 460 470 480 GDRPIADGSL LDFLRQVSTF GLSLVRLDIR QESDRHTAVL DAITKHLGIG SYREWSEEHR 490 500 510 520 530 540 REWLLSELRG KRPLFGPDLP KTEEIADVLD TFHVIAELPP DNFGAYIISM ATSPSDVLAV 550 560 570 580 590 600 ELLQRECHVQ QSLRVVPLFE KLADLEAAPA AMACLFSINW YRDRIKGKQE VMIGYSDSGK 610 620 630 640 650 660 DAGRLSAAWQ LYKAQEELVK VAKQYGVKLT MFHGRGGTVG RGGGPTHLAI LSQPPDTIHG 670 680 690 700 710 720 SLRVTVQGEV IEKSFGEEHL CFRTLQRFTA ATLEHGMHPP VSPKSEWRAL MDEMAIVATK 730 740 750 760 770 780 EYRSIVFQEP RFVEYFRLAT PELEYGRMNI GSRPSKRKPS GGIESLRAIP WIFAWTQTRF 790 800 810 820 830 840 HLPVWLGFGA AFKHVIQKDT KNLHTLQEMY NQWPFFRVTI DLVEMVFAKG GPGIAALYDK 850 860 870 880 890 900 LLVSEELRPF GDRLRANYEE NKLFLLQIAG HKDLLEGDPY LKQRLRLRDA YITTLNVCQA 910 920 930 940 950 960 YTLKQIRDPD YHVTVRPHLS KDYMESTKPA AELVKLNPTS EYAPGLEDTL ILTMKGIAAG LQNTG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000338 Genomic DNA. Translation: EEE82093.1.
RefSeq	XP_002302820.1. XM_002302784.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	3694.eugene3.00001960.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7458241.
KEGG	pop:POPTR_552645.
Phylogenomic databases
eggNOG	COG2352.
HOGENOM	HOG000238648.
KO	K01595.
ProtClustDB	CLSN2679806.
Family and domain databases
HAMAP	MF_00595. PEPcase_type1.
InterPro	IPR021135. PEP_COase. IPR018129. PEP_COase_AS. IPR022805. PEP_COase_bac/pln-type. IPR015813. Pyrv/PenolPyrv_Kinase. [Graphical view]
Pfam	PF00311. PEPcase. 1 hit. [Graphical view]
PRINTS	PR00150. PEPCARBXLASE.
SUPFAM	SSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
PROSITE	PS00781. PEPCASE_1. 1 hit. PS00393. PEPCASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9GTC2_POPTR

Accession

Primary (citable) accession number: B9GTC2

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)