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Protein
Submitted name:

Legumin family protein

Gene

POPTR_0002s03920g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Seed storage protein.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Seed storage proteinUniRule annotation, Storage protein

Names & Taxonomyi

Protein namesi
Submitted name:
Legumin family proteinImported
Gene namesi
ORF Names:POPTR_0002s03920gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componenti: Linkage group LGII

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222UniRule annotationAdd
BLAST
Chaini23 – 480458UniRule annotationPRO_5007749777Add
BLAST

Keywords - PTMi

Disulfide bondUniRule annotation

Interactioni

Subunit structurei

Hexamer; each subunit is composed of an acidic and a basic chain derived from a single precursor and linked by a disulfide bond.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliB9GS11.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 250209Cupin_1InterPro annotationAdd
BLAST
Domaini306 – 455150Cupin_1InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the 11S seed storage protein (globulins) family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiENOG410IHSE. Eukaryota.
ENOG410YATH. LUCA.
HOGENOMiHOG000217279.
InParanoidiB9GS11.
OMAiPHAGQSH.
OrthoDBiEOG093607KS.

Family and domain databases

Gene3Di2.60.120.10. 2 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 2 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9GS11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKTYFLLSL SLFLVLFHGS LGRRADRPCQ QQQQGQCQLD RLNALRPDDR
60 70 80 90 100
IKCEAGVIES WDPNHDQFQC AGVAVVRRTI EPNGLLLPSY TNAPQLVYIV
110 120 130 140 150
QGKVLTGTLM PGCPETFQES QESRGQDSRR FQDQHQKVRQ FREGDVIALP
160 170 180 190 200
AGVAHWFFNE GNEPVVAVSV IDVAHSANQL DVLSPRNFYL AGNPEDEFRQ
210 220 230 240 250
VEDQPRRHGE QQTGRESYRG HGQQQCNNVF CGMDTRFLAE AFNINEQVAR
260 270 280 290 300
RLQGESDRRG NIVRVKGGLQ IVRPPSLRQE EQIQQQRPGE QFNGLEETMC
310 320 330 340 350
TMRIGENIGD PSRADVFTPE AGRISTVNSH NLPILRYIQL SAERGVLYNE
360 370 380 390 400
AMMVPHWNLN AHSIMYAIRG QARIQVVDHS GRTVFDGEMR EGQVLTVPQN
410 420 430 440 450
FAVVKRAEQN RFEWVSFKTN DNAMISPLAG RTSAIRAMPA EVLANAFRIS
460 470 480
VEEARRIKFE RQETTLVSLR SSRSGSWAEA
Length:480
Mass (Da):54,329
Last modified:March 24, 2009 - v1
Checksum:i623E89232896C5FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000338 Genomic DNA. Translation: EEE80048.1.
RefSeqiXP_002300775.1. XM_002300739.2.

Genome annotation databases

EnsemblPlantsiPOPTR_0002s03920.1; POPTR_0002s03920.1; POPTR_0002s03920.
GeneIDi7479748.
GrameneiPOPTR_0002s03920.1; POPTR_0002s03920.1; POPTR_0002s03920.
KEGGipop:POPTR_0002s03920g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000338 Genomic DNA. Translation: EEE80048.1.
RefSeqiXP_002300775.1. XM_002300739.2.

3D structure databases

ProteinModelPortaliB9GS11.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPOPTR_0002s03920.1; POPTR_0002s03920.1; POPTR_0002s03920.
GeneIDi7479748.
GrameneiPOPTR_0002s03920.1; POPTR_0002s03920.1; POPTR_0002s03920.
KEGGipop:POPTR_0002s03920g.

Phylogenomic databases

eggNOGiENOG410IHSE. Eukaryota.
ENOG410YATH. LUCA.
HOGENOMiHOG000217279.
InParanoidiB9GS11.
OMAiPHAGQSH.
OrthoDBiEOG093607KS.

Family and domain databases

Gene3Di2.60.120.10. 2 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 2 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB9GS11_POPTR
AccessioniPrimary (citable) accession number: B9GS11
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: September 7, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.