B9GN77 (B9GN77_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE80386.1

Gene names

ORF Names:

POPTRDRAFT_551700 EMBL EEE80386.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	683 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro carboxypeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9GN77 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: D8F1936A6259C8CA	FASTA	683	76,817
	10 20 30 40 50 60 MGSGKILCTI LSLFSQFMAA FSNLQQNENP SMGFHGGEKG TGSSLLSEVV QLHIQKDYVV 70 80 90 100 110 120 LDNGILQVTL SNPGGHVTGI QYNGLENLLE TDNGESDRGY WDVVWSGEGV TRKKGNLDRL 130 140 150 160 170 180 DGTNLTVVVE SEEKVEISFT RMWNSSLQAK VVPLNFDKRY VMLRGSSGFY TYAIYEHLRG 190 200 210 220 230 240 WPAFDLDNTR IVFKLTRQKF RYMAIADNRQ RYMPLPEDRS PERGQTLAYP EAVLLVHPVE 250 260 270 280 290 300 PEFEGEVDDK YAYSCESKDI SVHGWISADP LVGFWQITPS HEFRTGGPLK QFLTSHVGPT 310 320 330 340 350 360 NLGVMHSTHY AGADVTIKIG PNEPWKKVYG PVFAYVNSLS DGRDPLSLWK DAKKQMMNEV 370 380 390 400 410 420 HKWPYDFIAS EDFPPSKQRG SVGGRLLVLE RYVSNATISA EGAYVGLAAP GEAGSWQLES 430 440 450 460 470 480 KGYQFWTKTD EGGNFTINGI RPGDYNLYAW VPGFIGDYKF TSVININSGS NIDIGDLVYE 490 500 510 520 530 540 APRNGSTLWE IGFPDRSAAE FYIPDANPKY INKLYLKQER YRQYGLWERY AELYPKADLV 550 560 570 580 590 600 FTVGKSNHTT DWFFAQVTRK KDNTTYEGTT WQIKFLLDEV DERAAYKLRM ALATANVAEL 610 620 630 640 650 660 EVRVNEPNAN PVFSTGEIGK DNTIARHGIH GLYRLFNVDI PGAQLLIGNN TIFLTQTASI 670 680 SPFQGVMYDY IRLEGPPPPH KAL

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000338 Genomic DNA. Translation: EEE80386.1.
RefSeq	XP_002301113.1. XM_002301077.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	POPTR_0002s11080.1; POPTR_0002s11080.1; POPTR_0002s11080.
GeneID	7467218.
KEGG	pop:POPTR_551700.
Phylogenomic databases
GeneTree	EPGT00050000014513.
OMA	HVGPTNL.
PhylomeDB	B9GN77.
Family and domain databases
InterPro	IPR013784. Carb-bd-like_fold. IPR014766. CarboxyPept_regulatory_dom. IPR008979. Galactose-bd-like. IPR011013. Glyco_hydro-type_carb-bd. IPR010325. Rhamnogal_lyase. [Graphical view]
Gene3D	G3DSA:2.60.40.1120. CarboxyPept_regulatory. 1 hit.
Pfam	PF06045. Rhamnogal_lyase. 1 hit. [Graphical view]
SUPFAM	SSF49452. CBD_4. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B9GN77_POPTR

Accession

Primary (citable) accession number: B9GN77

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)