B9GMU5 (B9GMU5_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE82686.1

Gene names

ORF Names:

POPTRDRAFT_640120 EMBL EEE82686.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	440 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	pentose-phosphate shunt Inferred from electronic annotation. Source: InterPro response to cadmium ion Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Cellular_component	chloroplast stroma Inferred from electronic annotation. Source: EnsemblPlants/Gramene mitochondrion Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9GMU5 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 9B2B9C57C8CCFDDE	FASTA	440	47,834
	10 20 30 40 50 60 MATISKLSNP SPAASLPAPS SSSSLPRVFL GFNTKTSFSK VASSSSGLSL TNTQPWRTSF 70 80 90 100 110 120 VVRCSQSSGN VSPIKRTTLH DLYEREGQSP WYDNLCRPVT DLIPLIESGV RGVTSNPAIF 130 140 150 160 170 180 QKAISSSNAY NDQFRELVQA GKDIETAYWE LVVKDIQDAC KLFEPIYDQT DGGDGYVSVE 190 200 210 220 230 240 VSPRLADDTQ GTVEAAKWLH KVVDRPNVYI KIPATAPCIP SIKEVISLGI SVNVTLIFSL 250 260 270 280 290 300 TRYEAVIDAY LDGLEASGLS DLSRVTSVAS FFVSRVDTLI DKMLEKIGTP EALDLRGKAA 310 320 330 340 350 360 VAQAGLAYKL YQKKFSGPRW EALVKKGAKK QRLLWASTSV KNPAYPDTLY VAPLIGPDTV 370 380 390 400 410 420 STMPDQALQA FVDHGSVART IDSNVSEAEG IYNALEKLGI DWGYVGDQLE VEGVDSFKKS 430 440 FDSLLDTLQE KANSLKLVSP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000337 Genomic DNA. Translation: EEE82686.1.
RefSeq	XP_002297881.1. XM_002297845.1.
UniGene	Pth.17280.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	3694.grail3.0008017101.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7482826.
KEGG	pop:POPTR_640120.
Phylogenomic databases
eggNOG	COG0176.
HOGENOM	HOG000226074.
KO	K00616.
ProtClustDB	CLSN2687015.
Family and domain databases
Gene3D	3.20.20.70. 1 hit.
HAMAP	MF_00493. Transaldolase_2.
InterPro	IPR013785. Aldolase_TIM. IPR001585. Transaldolase. IPR004732. Transaldolase_2. IPR018225. Transaldolase_AS. [Graphical view]
PANTHER	PTHR10683. PTHR10683. 1 hit.
Pfam	PF00923. Transaldolase. 1 hit. [Graphical view]
PIRSF	PIRSF036915. Trnald_Bac_Plnt. 1 hit.
TIGRFAMs	TIGR00876. tal_mycobact. 1 hit.
PROSITE	PS01054. TRANSALDOLASE_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9GMU5_POPTR

Accession

Primary (citable) accession number: B9GMU5

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	April 3, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)