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B9GMU4 (B9GMU4_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE82685.1
Gene names
ORF Names:POPTRDRAFT_640119 EMBL EEE82685.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length412 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9GMU4 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 5DD30B0F36FA1449

FASTA41246,977
        10         20         30         40         50         60 
MRTCLWVFAV VLVFGFVDGK EIERLRTERI SGSAGDVLDD DPVGRLKVYV YELPSKYNKK 

        70         80         90        100        110        120 
LLQKDPRCLT HMFAAEIFMH RFLLSSPVRT LNPDEADWFY SPIYPTCDLT PMGLPLPFKS 

       130        140        150        160        170        180 
PRMMRSAIQL ISSNWPYWNR TEGADHFFVV PHDFGACFHY QEEKAIERGI LPLLQRSTLV 

       190        200        210        220        230        240 
QTFGQRNHVC LNEGSITIPP FAPPQKMQAH QIPPDIPRSI FVYFRGLFYD VNNDPEGGYY 

       250        260        270        280        290        300 
ARGARAAVWE NFKNNPLFDI STDHPTTYYE DMQRAIFCLC PLGWAPWSPR LVEAVVFGCI 

       310        320        330        340        350        360 
PVIIADDIVL PFADAIPWEE IGVFVAEEDV PNLDTILTSI PPEVILRKQR LLANPSMKRA 

       370        380        390        400        410 
MLFPQPAQPG DAFHQILNGL ARKLPHDRSV YLKSGQNILN WTAGPVGDLK PW

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000337 Genomic DNA. Translation: EEE82685.1.
RefSeqXP_002297880.1. XM_002297844.1.
UniGenePth.9824.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0001s12940.1; POPTR_0001s12940.1; POPTR_0001s12940.
GeneID7491436.
KEGGpop:POPTR_640119.

Phylogenomic databases

OMARNPDEAD.
PhylomeDBB9GMU4.
ProtClustDBCLSN2682887.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GMU4_POPTR
AccessionPrimary (citable) accession number: B9GMU4
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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