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B9GMG3 (B9GMG3_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE84088.1
Gene names
ORF Names:POPTRDRAFT_814873 EMBL EEE84088.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length611 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processbranched chain family amino acid biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functiondihydroxy-acid dehydratase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9GMG3 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: D3FAAAAADEB0A859

FASTA61165,798
        10         20         30         40         50         60 
MQSTFISPRA TPPKPQMSFP TQPHFPTRLP PYSLRVKAQS VAVEPSQATT TVGQKLNKYS 

        70         80         90        100        110        120 
SRITEPKSQG GSQAILHGVG LSDADMSKPQ IGISSVWYEG NTCNMHLLKL SEAVKRGVEE 

       130        140        150        160        170        180 
AGMVGFRFNT IGVSDAISMG TRGMCYSLQS RDLIADSIET VMSAQWYDGN ISIPGCDKNM 

       190        200        210        220        230        240 
PGTIMAMGRL NRPSIMVYGG TIKPGHFNGH TYDIVSAFQV YGEYVSGSIN DDERKNVIRN 

       250        260        270        280        290        300 
SCPGAGACGG MYTANTMASA IEALGMSLPY SSSIPAENQL KLDECRLAGK YLLELLKMDL 

       310        320        330        340        350        360 
KPRDIITRKS LRNAMVIVMA LGGSTNAVLH LIAIARSVGL ELTLDDFQKV SDEVPFLADL 

       370        380        390        400        410        420 
KPSGKYVMED VHKIGGTPAV LRYLLEHGFL DGDCLTVTGK TLAENVRNCP PLSEGQDIIK 

       430        440        450        460        470        480 
SLDNPIKKTG HLQILRGNLA PEGSVAKITG KEGLYFSGPA LVFEGEESMI AAISEDPMSF 

       490        500        510        520        530        540 
KGKVIVIRGE GPKGGPGMPE MLTPTSAIMG AGLGKDCALL TDGRFSGGSH GFVVGHVSPE 

       550        560        570        580        590        600 
AQEGGPIGLV RNGDIINVDV REKRLDVQLT DMELEERRKN WTPPPYKATR GVLYKYIKNV 

       610 
QSSSKGCVTD E

« Hide

References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000337 Genomic DNA. Translation: EEE84088.1.
RefSeqXP_002299283.1. XM_002299247.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB9GMG3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0001s14300.1; POPTR_0001s14300.1; POPTR_0001s14300.
GeneID7460521.
KEGGpop:POPTR_814873.

Phylogenomic databases

GeneTreeEPGT00050000016987.
OMANMPGAMI.
PhylomeDBB9GMG3.
ProtClustDBCLSN2684349.

Family and domain databases

HAMAPMF_00012. IlvD.
[Tree]
InterProIPR015928. Aconitase/3IPM_dehydase_swvl.
IPR004404. DihydroxyA_deHydtase.
IPR000581. DiOHA_6PGluconate_deHydtase.
IPR020558. DiOHA_6PGluconate_deHydtase_CS.
[Graphical view]
KOK01687.
PANTHERPTHR21000. ILVD_EDD_family. 1 hit.
PfamPF00920. ILVD_EDD. 1 hit.
[Graphical view]
SUPFAMSSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit.
TIGRFAMsTIGR00110. IlvD. 1 hit.
PROSITEPS00886. ILVD_EDD_1. 1 hit.
PS00887. ILVD_EDD_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GMG3_POPTR
AccessionPrimary (citable) accession number: B9GMG3
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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