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B9GLS5 (B9GLS5_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL ERP65223.1
Gene names
ORF Names:POPTR_0001s07390g EMBL EEE83972.2
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome] EMBL EEE83972.2
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus

Protein attributes

Sequence length669 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. SAAS SAAS001214

Subcellular location

Nucleus By similarity.

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains 1 post-SET domain. RuleBase RU004541

Contains 1 pre-SET domain.

Contains SET domain. SAAS SAAS001214

Contains post-SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Sequences

Sequence LengthMass (Da)Tools
B9GLS5 [UniParc].

Last modified December 11, 2013. Version 2.
Checksum: 57D146C107C432CD

FASTA66973,863
        10         20         30         40         50         60 
MVMEGGGSGN NSTPIIDKTR VLDVEPLRTL VPVFPSSSKA PPFGPYSSGF APFYPFSAPQ 

        70         80         90        100        110        120 
GSQATPDLNQ QTHTTPAAPL RSFRATESNG DAFDGEYESY DGSTGSAKRR PKSSSQKRAR 

       130        140        150        160        170        180 
KIQDLDFTLS VDENNFVVGV SLSERDDGNR EVVHSIQMRF DALRRRLSQL EDAKESPAGI 

       190        200        210        220        230        240 
IRRADLKAGN ILMTKQVRTN TRKRIGTVPG VEIGDIFFFR MEMCLLGLHA PSMAGIDYMS 

       250        260        270        280        290        300 
VRNDLEEEPL AVSIVSSGYY DDDAEDKDVL IYSGQGGAAN KDKGATDQKL ERGNLALERS 

       310        320        330        340        350        360 
LRRGNEVRVI RGMKDSVNQA SKVYVYDGLF RIQESWVEKA KSGCNIFKYK LVRIPGQPDA 

       370        380        390        400        410        420 
FGVWKSIEKW REGLSSRAGL ILPDLTSGAE SVPVALVNDV DEEKGPAYFT YVSTVKYSKS 

       430        440        450        460        470        480 
FKLTQPAYGC NCRNACQPGN LNCSCIRKNE GNFPYTANGV LVCRAPMIHE CGPTCPCFPN 

       490        500        510        520        530        540 
CKNRASQTGL KARLEVFKTK DRGWGLRSWD SFRAGTFICE YAGEVIEKVS QVGEGEGDGY 

       550        560        570        580        590        600 
VFDTSHVYES FKWNYEPGLV EEDGSIEAIE EPNVPSPLVI SSKNVGNVAR FMNHSCYPNV 

       610        620        630        640        650        660 
FWQPIMYENN NESFIHIAFF AMRHIPPMTE LTFDYGKSCS GEAAADGGST SRGRRKCLCG 


APICRGYFG 

« Hide

References

« Hide 'large scale' references
[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.
[2]US DOE Joint Genome Institute (JGI-PGF)
Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. expand/collapse author list , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D.
Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Nisqually.
[3]US DOE Joint Genome Institute (JGI-PGF)
Shu S., Lucas S., Jenkins J., Grimwood J., Muchero w., Hayes R., Goodstein D., Rokhsar D., Schmutz J., Tuskan G.
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000337 Genomic DNA. Translation: EEE83972.2.
CM000337 Genomic DNA. Translation: ERP65223.1.
RefSeqXP_002299167.2. XM_002299131.2.
XP_006368654.1. XM_006368592.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3694.eugene3.32850001.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7476804.
KEGGpop:POPTR_0001s07390g.

Phylogenomic databases

eggNOGCOG3440.
KOK11420.
OMAIHIAFFA.

Family and domain databases

Gene3D2.30.280.10. 1 hit.
InterProIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTSM00508. PostSET. 1 hit.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view]
SUPFAMSSF88697. SSF88697. 1 hit.
PROSITEPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GLS5_POPTR
AccessionPrimary (citable) accession number: B9GLS5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: December 11, 2013
Last modified: July 9, 2014
This is version 45 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)