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B9GLS5

- B9GLS5_POPTR

UniProt

B9GLS5 - B9GLS5_POPTR

Protein
Submitted name:

Histone-lysine N-methyltransferase family protein

Gene

POPTR_0001s07390g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 2 (11 Dec 2013)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].SAAS annotation

    GO - Molecular functioni

    1. histone-lysine N-methyltransferase activity Source: InterPro
    2. zinc ion binding Source: InterPro

    GO - Biological processi

    1. leaf development Source: EnsemblPlants/Gramene
    2. regulation of cell size Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    MethyltransferaseUniRule annotationImported, Transferase

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Histone-lysine N-methyltransferase family proteinImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    ORF Names:POPTR_0001s07390gImported
    OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
    Taxonomic identifieri3694 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
    ProteomesiUP000006729: Miscellaneous, Linkage group LGI, whole genome shotgun sequence., UP000006729: Miscellaneous, Linkage group LGI, UP000006729: Unassembled WGS sequence

    Subcellular locationi

    Nucleus UniRule annotation
    Nucleus By similarity

    GO - Cellular componenti

    1. chromosome Source: UniProtKB-KW
    2. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    ChromosomeSAAS annotation, NucleusUniRule annotationSAAS annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi3694.eugene3.32850001.

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SET domain.UniRule annotation
    Contains 1 post-SET domain.
    Contains 1 pre-SET domain.UniRule annotation
    Contains SET domain.SAAS annotation
    Contains post-SET domain.SAAS annotation
    Contains pre-SET domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG3440.
    KOiK11420.
    OMAiIHIAFFA.

    Family and domain databases

    Gene3Di2.30.280.10. 1 hit.
    InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
    IPR003616. Post-SET_dom.
    IPR007728. Pre-SET_dom.
    IPR003606. Pre-SET_Zn-bd_sub.
    IPR015947. PUA-like_domain.
    IPR001214. SET_dom.
    IPR003105. SRA_YDG.
    [Graphical view]
    PfamiPF05033. Pre-SET. 1 hit.
    PF02182. SAD_SRA. 1 hit.
    PF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00508. PostSET. 1 hit.
    SM00468. PreSET. 1 hit.
    SM00317. SET. 1 hit.
    SM00466. SRA. 1 hit.
    [Graphical view]
    SUPFAMiSSF88697. SSF88697. 1 hit.
    PROSITEiPS50868. POST_SET. 1 hit.
    PS50867. PRE_SET. 1 hit.
    PS51575. SAM_MT43_SUVAR39_2. 1 hit.
    PS50280. SET. 1 hit.
    PS51015. YDG. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9GLS5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVMEGGGSGN NSTPIIDKTR VLDVEPLRTL VPVFPSSSKA PPFGPYSSGF    50
    APFYPFSAPQ GSQATPDLNQ QTHTTPAAPL RSFRATESNG DAFDGEYESY 100
    DGSTGSAKRR PKSSSQKRAR KIQDLDFTLS VDENNFVVGV SLSERDDGNR 150
    EVVHSIQMRF DALRRRLSQL EDAKESPAGI IRRADLKAGN ILMTKQVRTN 200
    TRKRIGTVPG VEIGDIFFFR MEMCLLGLHA PSMAGIDYMS VRNDLEEEPL 250
    AVSIVSSGYY DDDAEDKDVL IYSGQGGAAN KDKGATDQKL ERGNLALERS 300
    LRRGNEVRVI RGMKDSVNQA SKVYVYDGLF RIQESWVEKA KSGCNIFKYK 350
    LVRIPGQPDA FGVWKSIEKW REGLSSRAGL ILPDLTSGAE SVPVALVNDV 400
    DEEKGPAYFT YVSTVKYSKS FKLTQPAYGC NCRNACQPGN LNCSCIRKNE 450
    GNFPYTANGV LVCRAPMIHE CGPTCPCFPN CKNRASQTGL KARLEVFKTK 500
    DRGWGLRSWD SFRAGTFICE YAGEVIEKVS QVGEGEGDGY VFDTSHVYES 550
    FKWNYEPGLV EEDGSIEAIE EPNVPSPLVI SSKNVGNVAR FMNHSCYPNV 600
    FWQPIMYENN NESFIHIAFF AMRHIPPMTE LTFDYGKSCS GEAAADGGST 650
    SRGRRKCLCG APICRGYFG 669
    Length:669
    Mass (Da):73,863
    Last modified:December 11, 2013 - v2
    Checksum:i57D146C107C432CD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000337 Genomic DNA. Translation: EEE83972.2.
    CM000337 Genomic DNA. Translation: ERP65223.1.
    RefSeqiXP_002299167.2. XM_002299131.2.
    XP_006368654.1. XM_006368592.1.

    Genome annotation databases

    GeneIDi7476804.
    KEGGipop:POPTR_0001s07390g.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000337 Genomic DNA. Translation: EEE83972.2 .
    CM000337 Genomic DNA. Translation: ERP65223.1 .
    RefSeqi XP_002299167.2. XM_002299131.2.
    XP_006368654.1. XM_006368592.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3694.eugene3.32850001.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7476804.
    KEGGi pop:POPTR_0001s07390g.

    Phylogenomic databases

    eggNOGi COG3440.
    KOi K11420.
    OMAi IHIAFFA.

    Family and domain databases

    Gene3Di 2.30.280.10. 1 hit.
    InterProi IPR025794. Hist-Lys_N-MeTrfase_plant.
    IPR003616. Post-SET_dom.
    IPR007728. Pre-SET_dom.
    IPR003606. Pre-SET_Zn-bd_sub.
    IPR015947. PUA-like_domain.
    IPR001214. SET_dom.
    IPR003105. SRA_YDG.
    [Graphical view ]
    Pfami PF05033. Pre-SET. 1 hit.
    PF02182. SAD_SRA. 1 hit.
    PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00508. PostSET. 1 hit.
    SM00468. PreSET. 1 hit.
    SM00317. SET. 1 hit.
    SM00466. SRA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88697. SSF88697. 1 hit.
    PROSITEi PS50868. POST_SET. 1 hit.
    PS50867. PRE_SET. 1 hit.
    PS51575. SAM_MT43_SUVAR39_2. 1 hit.
    PS50280. SET. 1 hit.
    PS51015. YDG. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
      Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A.
      , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
      Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. NisquallyImported.
    2. Cited for: GENOME REANNOTATION.
      Strain: cv. NisquallyImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiB9GLS5_POPTR
    AccessioniPrimary (citable) accession number: B9GLS5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: December 11, 2013
    Last modified: October 1, 2014
    This is version 46 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3