Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Histone-lysine N-methyltransferase family protein

Gene

POPTR_0001s07390g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Catalytic activityi

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].SAAS annotation

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseUniRule annotationSAAS annotation, Transferase

Keywords - Ligandi

S-adenosyl-L-methionineSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Histone-lysine N-methyltransferase family proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:POPTR_0001s07390gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
ProteomesiUP000006729 Componenti: Linkage group LGI

Subcellular locationi

  1. Nucleus UniRule annotation

GO - Cellular componenti

  1. chromosome Source: UniProtKB-KW
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi3694.eugene3.32850001.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains 1 post-SET domain.UniRule annotation
Contains 1 pre-SET domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG3440.
InParanoidiB9GLS5.
KOiK11420.
OMAiHECGPTC.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00508. PostSET. 1 hit.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9GLS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVMEGGGSGN NSTPIIDKTR VLDVEPLRTL VPVFPSSSKA PPFGPYSSGF
60 70 80 90 100
APFYPFSAPQ GSQATPDLNQ QTHTTPAAPL RSFRATESNG DAFDGEYESY
110 120 130 140 150
DGSTGSAKRR PKSSSQKRAR KIQDLDFTLS VDENNFVVGV SLSERDDGNR
160 170 180 190 200
EVVHSIQMRF DALRRRLSQL EDAKESPAGI IRRADLKAGN ILMTKQVRTN
210 220 230 240 250
TRKRIGTVPG VEIGDIFFFR MEMCLLGLHA PSMAGIDYMS VRNDLEEEPL
260 270 280 290 300
AVSIVSSGYY DDDAEDKDVL IYSGQGGAAN KDKGATDQKL ERGNLALERS
310 320 330 340 350
LRRGNEVRVI RGMKDSVNQA SKVYVYDGLF RIQESWVEKA KSGCNIFKYK
360 370 380 390 400
LVRIPGQPDA FGVWKSIEKW REGLSSRAGL ILPDLTSGAE SVPVALVNDV
410 420 430 440 450
DEEKGPAYFT YVSTVKYSKS FKLTQPAYGC NCRNACQPGN LNCSCIRKNE
460 470 480 490 500
GNFPYTANGV LVCRAPMIHE CGPTCPCFPN CKNRASQTGL KARLEVFKTK
510 520 530 540 550
DRGWGLRSWD SFRAGTFICE YAGEVIEKVS QVGEGEGDGY VFDTSHVYES
560 570 580 590 600
FKWNYEPGLV EEDGSIEAIE EPNVPSPLVI SSKNVGNVAR FMNHSCYPNV
610 620 630 640 650
FWQPIMYENN NESFIHIAFF AMRHIPPMTE LTFDYGKSCS GEAAADGGST
660
SRGRRKCLCG APICRGYFG
Length:669
Mass (Da):73,863
Last modified:December 11, 2013 - v2
Checksum:i57D146C107C432CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000337 Genomic DNA. Translation: EEE83972.2.
CM000337 Genomic DNA. Translation: ERP65223.1.
RefSeqiXP_002299167.2. XM_002299131.2.
XP_006368654.1. XM_006368592.1.

Genome annotation databases

EnsemblPlantsiPOPTR_0001s07390.1; POPTR_0001s07390.1; POPTR_0001s07390.
POPTR_0001s07390.2; POPTR_0001s07390.2; POPTR_0001s07390.
GeneIDi7476804.
KEGGipop:POPTR_0001s07390g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000337 Genomic DNA. Translation: EEE83972.2.
CM000337 Genomic DNA. Translation: ERP65223.1.
RefSeqiXP_002299167.2. XM_002299131.2.
XP_006368654.1. XM_006368592.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.eugene3.32850001.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPOPTR_0001s07390.1; POPTR_0001s07390.1; POPTR_0001s07390.
POPTR_0001s07390.2; POPTR_0001s07390.2; POPTR_0001s07390.
GeneIDi7476804.
KEGGipop:POPTR_0001s07390g.

Phylogenomic databases

eggNOGiCOG3440.
InParanoidiB9GLS5.
KOiK11420.
OMAiHECGPTC.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00508. PostSET. 1 hit.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
    Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A.
    , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
    Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NisquallyImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB9GLS5_POPTR
AccessioniPrimary (citable) accession number: B9GLS5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: December 11, 2013
Last modified: April 29, 2015
This is version 52 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.