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B9GLS5

- B9GLS5_POPTR

UniProt

B9GLS5 - B9GLS5_POPTR

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Protein
Submitted name:

Histone-lysine N-methyltransferase family protein

Gene
POPTR_0001s07390g
Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].SAAS annotations

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
  2. zinc ion binding Source: InterPro

GO - Biological processi

  1. leaf development Source: EnsemblPlants/Gramene
  2. regulation of cell size Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseUniRule annotationImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Histone-lysine N-methyltransferase family proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:POPTR_0001s07390gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
ProteomesiUP000006729: Miscellaneous, Linkage group LGI, whole genome shotgun sequence., UP000006729: Miscellaneous, Linkage group LGI, UP000006729: Unassembled WGS sequence

Subcellular locationi

Nucleus By similarity

GO - Cellular componenti

  1. chromosome Source: UniProtKB-KW
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

ChromosomeSAAS annotations, NucleusSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi3694.eugene3.32850001.

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains 1 post-SET domain.UniRule annotation
Contains 1 pre-SET domain.
Contains SET domain.SAAS annotations
Contains post-SET domain.SAAS annotations
Contains pre-SET domain.SAAS annotations

Phylogenomic databases

eggNOGiCOG3440.
KOiK11420.
OMAiIHIAFFA.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00508. PostSET. 1 hit.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B9GLS5-1 [UniParc]FASTAAdd to Basket

« Hide

MVMEGGGSGN NSTPIIDKTR VLDVEPLRTL VPVFPSSSKA PPFGPYSSGF    50
APFYPFSAPQ GSQATPDLNQ QTHTTPAAPL RSFRATESNG DAFDGEYESY 100
DGSTGSAKRR PKSSSQKRAR KIQDLDFTLS VDENNFVVGV SLSERDDGNR 150
EVVHSIQMRF DALRRRLSQL EDAKESPAGI IRRADLKAGN ILMTKQVRTN 200
TRKRIGTVPG VEIGDIFFFR MEMCLLGLHA PSMAGIDYMS VRNDLEEEPL 250
AVSIVSSGYY DDDAEDKDVL IYSGQGGAAN KDKGATDQKL ERGNLALERS 300
LRRGNEVRVI RGMKDSVNQA SKVYVYDGLF RIQESWVEKA KSGCNIFKYK 350
LVRIPGQPDA FGVWKSIEKW REGLSSRAGL ILPDLTSGAE SVPVALVNDV 400
DEEKGPAYFT YVSTVKYSKS FKLTQPAYGC NCRNACQPGN LNCSCIRKNE 450
GNFPYTANGV LVCRAPMIHE CGPTCPCFPN CKNRASQTGL KARLEVFKTK 500
DRGWGLRSWD SFRAGTFICE YAGEVIEKVS QVGEGEGDGY VFDTSHVYES 550
FKWNYEPGLV EEDGSIEAIE EPNVPSPLVI SSKNVGNVAR FMNHSCYPNV 600
FWQPIMYENN NESFIHIAFF AMRHIPPMTE LTFDYGKSCS GEAAADGGST 650
SRGRRKCLCG APICRGYFG 669
Length:669
Mass (Da):73,863
Last modified:December 11, 2013 - v2
Checksum:i57D146C107C432CD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000337 Genomic DNA. Translation: EEE83972.2.
CM000337 Genomic DNA. Translation: ERP65223.1.
RefSeqiXP_002299167.2. XM_002299131.2.
XP_006368654.1. XM_006368592.1.

Genome annotation databases

GeneIDi7476804.
KEGGipop:POPTR_0001s07390g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000337 Genomic DNA. Translation: EEE83972.2 .
CM000337 Genomic DNA. Translation: ERP65223.1 .
RefSeqi XP_002299167.2. XM_002299131.2.
XP_006368654.1. XM_006368592.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3694.eugene3.32850001.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7476804.
KEGGi pop:POPTR_0001s07390g.

Phylogenomic databases

eggNOGi COG3440.
KOi K11420.
OMAi IHIAFFA.

Family and domain databases

Gene3Di 2.30.280.10. 1 hit.
InterProi IPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR003606. Pre-SET_Zn-bd_sub.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view ]
Pfami PF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view ]
SMARTi SM00508. PostSET. 1 hit.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view ]
SUPFAMi SSF88697. SSF88697. 1 hit.
PROSITEi PS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
    Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A.
    , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
    Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nisqually.
  2. Cited for: GENOME REANNOTATION.
    Strain: cv. Nisqually.
  3. Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB9GLS5_POPTR
AccessioniPrimary (citable) accession number: B9GLS5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: December 11, 2013
Last modified: July 9, 2014
This is version 45 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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