B9GLS5 (B9GLS5_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
SET domain protein EMBL EEE83972.1

Gene names

Name:	SDG948 EMBL EEE83972.1
ORF Names:	POPTRDRAFT_708413 EMBL EEE83972.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Reference proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	512 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Catalytic activity	S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. SAAS SAAS001214 S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N(6)-methyl-L-lysine. RuleBase RU004542
Subcellular location	Nucleus By similarity RuleBase RU004542.
Sequence similarities	Contains 1 SET domain. RuleBase RU004538 SAAS SAAS001214 Contains 1 post-SET domain. SAAS SAAS001214 Contains 1 pre-SET domain. RuleBase RU004542 SAAS SAAS001214

Ontologies

Keywords
Cellular component	Chromosome SAAS SAAS007728 Nucleus SAAS SAAS001214 RuleBase RU004542
Molecular function	Methyltransferase SAAS SAAS001214 RuleBase RU004541 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	chromosome Inferred from electronic annotation. Source: UniProtKB-KW nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	histone-lysine N-methyltransferase activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B9GLS5 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 1F3E7EBA874A69B6	FASTA	512	56,924
	10 20 30 40 50 60 MRFDALRRRL SQLEDAKESP AGIIRRADLK AGNILMTKQV RTNTRKRIGT VPGVEIGDIF 70 80 90 100 110 120 FFRMEMCLLG LHAPSMAGID YMSVRNDLEE EPLAVSIVSS GYYDDDAEDK DVLIYSGQGG 130 140 150 160 170 180 AANKDKGATD QKLERGNLAL ERSLRRGNEV RVIRGMKDSV NQASKVYVYD GLFRIQESWV 190 200 210 220 230 240 EKAKSGCNIF KYKLVRIPGQ PDAFGVWKSI EKWREGLSSR AGLILPDLTS GAESVPVALV 250 260 270 280 290 300 NDVDEEKGPA YFTYVSTVKY SKSFKLTQPA YGCNCRNACQ PGNLNCSCIR KNEGNFPYTA 310 320 330 340 350 360 NGVLVCRAPM IHECGPTCPC FPNCKNRASQ TGLKARLEVF KTKDRGWGLR SWDSFRAGTF 370 380 390 400 410 420 ICEYAGEVIE KVSQVGEGEG DGYVFDTSHV YESFKWNYEP GLVEEDGSIE AIEEPNVPSP 430 440 450 460 470 480 LVISSKNVGN VARFMNHSCY PNVFWQPIMY ENNNESFIHI AFFAMRHIPP MTELTFDYGK 490 500 510 SCSGEAAADG GSTSRGRRKC LCGAPICRGY FG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[2]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000337 Genomic DNA. Translation: EEE83972.1.
RefSeq	XP_002299167.1. XM_002299131.1.
UniGene	Pth.5160.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7476804.
KEGG	pop:POPTR_708413.
Phylogenomic databases
eggNOG	COG3440.
KO	K11420.
Gene expression databases
ArrayExpress	B9GLS5.
Family and domain databases
Gene3D	2.30.280.10. 1 hit.
InterPro	IPR025794. Hist-Lys_N-MeTrfase_plant. IPR003616. Post-SET_dom. IPR007728. Pre-SET_dom. IPR003606. Pre-SET_Zn-bd_sub. IPR001214. SET_dom. IPR003105. SRA_YDG. [Graphical view]
Pfam	PF05033. Pre-SET. 1 hit. PF00856. SET. 1 hit. PF02182. YDG_SRA. 1 hit. [Graphical view]
SMART	SM00508. PostSET. 1 hit. SM00468. PreSET. 1 hit. SM00317. SET. 1 hit. SM00466. SRA. 1 hit. [Graphical view]
PROSITE	PS50868. POST_SET. 1 hit. PS50867. PRE_SET. 1 hit. PS51575. SAM_MT43_SUVAR39_2. 1 hit. PS50280. SET. 1 hit. PS51015. YDG. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9GLS5_POPTR

Accession

Primary (citable) accession number: B9GLS5

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	April 3, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)