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B9GKC9 (B9GKC9_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE82815.1
Gene names
ORF Names:POPTRDRAFT_797347 EMBL EEE82815.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9GKC9 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: B5EE147D2AAD46D6

FASTA48352,986
        10         20         30         40         50         60 
MESEEPCSRA TSYGDALGKA ILFFEGQRSG ELPSDQRVKW RGNSAISDGK PEKVNLTGGY 

        70         80         90        100        110        120 
YDAGDNVKFG WPMAFTVTLL SWAGIEYQKE ISSVNQLGYL HTAIRWGTNF ILECHTSSTA 

       130        140        150        160        170        180 
FYTQVGDGNA DHQCWERPED MDTPRTLYKI TPNSPGTEAA AEASAALSAA SIVFKAVDPS 

       190        200        210        220        230        240 
YSTKLLQQSQ SLFDLADNYR SSFKDSCPFY CSFSGYQDEL LWAATWLYKA SGENKYLSYI 

       250        260        270        280        290        300 
SSNKGWSQAV SEFSWDNKFA GAQTLLAKEF YGGKQDFDKF KSDAESFVCA LMPGSSSVQI 

       310        320        330        340        350        360 
KTTPGGLLYT RDSSNLQYVT SSSMLLFIYS NTLTAAHVSG IQCGSAHFSA LQIKAFAKSQ 

       370        380        390        400        410        420 
VDYILGSNPM KMSYMVGFGS KYPTQMHHRG ASIPSVQALP SKVGCNDGYS SYYFASQPNP 

       430        440        450        460        470        480 
NTHVGAIVGG PDSNDQYKDL RSDYSHAEPT TYMNAAFVGS VAALQNKLSR AYMTTKTNTT 


YLL

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000337 Genomic DNA. Translation: EEE82815.1.
RefSeqXP_002298010.1. XM_002297974.1.
UniGenePth.16267.

3D structure databases

ProteinModelPortalB9GKC9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7472742.
KEGGpop:POPTR_797347.

Phylogenomic databases

GeneTreeEPGT00070000030791.
OMANFILRAH.
ProtClustDBPLN02613.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
PfamPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
PROSITEPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GKC9_POPTR
AccessionPrimary (citable) accession number: B9GKC9
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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