B9GJK4 (B9GJK4_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEE85340.1

Gene names

ORF Names:

POPTRDRAFT_177112 EMBL EEE85340.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	341 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEE85340.1
	Non-terminal residue	341	1	EMBL EEE85340.1

Sequences

	Sequence		Length	Mass (Da)
	B9GJK4 [UniParc]. Last modified March 24, 2009. Version 1. Checksum: 5C48CB7F58A427B4	FASTA	341	39,003
	10 20 30 40 50 60 LNHIVFGIAG SSQLWKRRKE FIRLWWRKDS SMRGHVWVEE QVDDKEWDES LPRIMISEDT 70 80 90 100 110 120 SRFRYTNPTG HPSGLRIARI VLETFRLGLS DVRWFVLGDD DTIFSVDNLV DVLSKYDCNE 130 140 150 160 170 180 MVYIGGPSES HSANTYFSHN MAYGGGGIAI SYPLAKALYS VLDDCLERYH RLYGSDDRLL 190 200 210 220 230 240 ACISELGVPL SREHGFHQWD IRGSAHGLLS AHPISPFVSI HHVEVVEPIY PGMSSLESLK 250 260 270 280 290 300 LFTKAMKVDL MSFLQRSICY DHARRLTFSV SLGYAIQVFP SIVLPRVLER SEMTFSAWNK 310 320 330 340 IHNLNEFDLD TRDPSKSVCK SPVLFFLEDV ERQGNTTLGT Y

References

[1]

"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000337 Genomic DNA. Translation: EEE85340.1.
RefSeq	XP_002300535.1. XM_002300499.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7490735.
KEGG	pop:POPTR_177112.
Phylogenomic databases
GeneTree	EPGT00070000030971.
OMA	PSESHSA.
Family and domain databases
InterPro	IPR006740. DUF604. [Graphical view]
Pfam	PF04646. DUF604. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B9GJK4_POPTR

Accession

Primary (citable) accession number: B9GJK4

Entry history

Integrated into UniProtKB/TrEMBL:	March 24, 2009
Last sequence update:	March 24, 2009
Last modified:	December 14, 2011
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)