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Protein
Submitted name:

Translation initiation factor IF-2 family protein

Gene

POPTR_0001s42720g

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionInitiation factorImported
Biological processProtein biosynthesis

Names & Taxonomyi

Protein namesi
Submitted name:
Translation initiation factor IF-2 family proteinImported
Gene namesi
ORF Names:POPTR_0001s42720gImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componenti: Linkage group LGI

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_500288218129 – 1020Sequence analysisAdd BLAST992

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0001s42720.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini509 – 666Tr-type GInterPro annotationAdd BLAST158

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1145. Eukaryota.
COG0532. LUCA.
HOGENOMiHOG000076906.
InParanoidiB9GHX7.
KOiK02519.
OMAiGNPQACV.
OrthoDBiEOG093604R2.

Family and domain databases

Gene3Di3.40.50.10050. 1 hit.
HAMAPiMF_00100_B. IF_2_B. 1 hit.
InterProiView protein in InterPro
IPR006847. IF2_N.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR000178. TF_IF2_bacterial-like.
IPR015760. TIF_IF2.
IPR023115. TIF_IF2_dom3.
IPR036925. TIF_IF2_dom3_sf.
IPR009000. Transl_B-barrel_sf.
PANTHERiPTHR43381. PTHR43381. 1 hit.
PfamiView protein in Pfam
PF00009. GTP_EFTU. 1 hit.
PF11987. IF-2. 1 hit.
PF04760. IF2_N. 1 hit.
SUPFAMiSSF50447. SSF50447. 2 hits.
SSF52156. SSF52156. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00487. IF-2. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiView protein in PROSITE
PS51722. G_TR_2. 1 hit.
PS01176. IF2. 1 hit.

Sequencei

Sequence statusi: Complete.

B9GHX7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSMVVLVGS MPSLASLVSL GSLSGSTATS SCVESSSYSV VKRVSLSKRS
60 70 80 90 100
LRRAKSWHCV CKYSVTATDF IAEQGNAVSL DSSSNGDGND GDSGVVLKPS
110 120 130 140 150
PKPVLKSPAG SKDETLLSMN SVGWGSSRGS GDSDEEEERN KVIESLDEVL
160 170 180 190 200
EKAGKLETSK QSQVGASAGS IRKENGNVNK MTPSNSYTDS RNVNSTAATR
210 220 230 240 250
KAKTLRSVWR KGDTVSSVQR IVKEVPKASN KFIKEEPKTV EGTKLESQSR
260 270 280 290 300
VPLKPPQPPL RPQPKLQAKP SAAPSPIIKK PVVLKDVGAA PKSPIKDETG
310 320 330 340 350
SGAAQSKGQP ILIDKFARKK PVVDPVIAQA VLAPTKPGKG PAPGKYKDRK
360 370 380 390 400
KGASPGTPRR RMMDNDVEIP DEELNVSIPG AATARKGRKW TKASRKAAKI
410 420 430 440 450
QAARDAAPVK VEILEVGEKG MSIEELAYNL TMGEGEILGL LFSKGIKPDG
460 470 480 490 500
VQTLDKEMVK MICKEYEVEV IDADPVRFEE MAKKNEILDE DDLDKLQERP
510 520 530 540 550
PVLTIMGHTT LLDHIRKSKV AASEAGGITQ GIGAYKVMVP VDGKLQPCVF
560 570 580 590 600
LDTPGHEAFG AMRARGARVT DIAIIVVAAD DGIRPQTNEA IAHAKAAGVP
610 620 630 640 650
IVIAINKIDK DGANPERVMQ ELSSIGLMPE DWGGDVPMVQ VSALKGENID
660 670 680 690 700
DLLETVMLVA ELQELKANPD RNAKGTVIEA GLDKSKGPIA TFIVQKGTLK
710 720 730 740 750
RGDVVVCGEA FGKVRALFEG GGKRVDQVGP SIPVQVIGLS NVPIAGDEFE
760 770 780 790 800
AVASLDIARE KAEARAELLW NERISAKAGD GKVTLSSLAS AVSAGKLSGL
810 820 830 840 850
DLHQLNIIMK VDLQGSMEAV RQALQVLPRD NVTLKFLLQA TGDVSNSDVD
860 870 880 890 900
LAVVSEAIIL GFNVKAPGSV KSYAEKKGVE IRLYRVIYEL IDEVRNAMEG
910 920 930 940 950
LLELVEEQEP IGSTVVRAVF SSGSGRVAGC MVTEGKVIKG CGIRVVRNRK
960 970 980 990 1000
TVHVGVLDSL RRVKEIVKEV NAGLECGIGA EDYDDWEEGD IIEAFNTVEK
1010 1020
KRTLEEASAS MAAAMEEVGL
Length:1,020
Mass (Da):108,789
Last modified:December 11, 2013 - v2
Checksum:i2FD96F87245B420C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000337 Genomic DNA. Translation: EEE85284.2.
RefSeqiXP_002300479.2. XM_002300443.2.

Genome annotation databases

EnsemblPlantsiPOPTR_0001s42720.1; POPTR_0001s42720.1; POPTR_0001s42720.
GeneIDi7459166.
GrameneiPOPTR_0001s42720.1; POPTR_0001s42720.1; POPTR_0001s42720.
KEGGipop:POPTR_0001s42720g.

Similar proteinsi

Entry informationi

Entry nameiB9GHX7_POPTR
AccessioniPrimary (citable) accession number: B9GHX7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: December 11, 2013
Last modified: November 22, 2017
This is version 67 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported