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B9GHE5 (B9GHE5_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EEE85257.1
Gene names
ORF Names:POPTRDRAFT_176534 EMBL EEE85257.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length400 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL EEE85257.1
Non-terminal residue4001 EMBL EEE85257.1

Sequences

Sequence LengthMass (Da)Tools
B9GHE5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: A7F8CA4A75E547A2

FASTA40045,862
        10         20         30         40         50         60 
CEGGMSVYLY DMPAEFNKGL LKDCSHLNPY TDMCPHVANR GLGQPLSYMA ESAVATTWFA 

        70         80         90        100        110        120 
THQFIAEMIF HARMENHPCR VLDPINAKLF YVPFYGGLDA SSKFHDANLT ARDELAVRLA 

       130        140        150        160        170        180 
DYLRSKPWWE RHHGKDHFLV LGRTAWDFLR RNNDFGNSLL NLPDVQNMSV LTVERNPWDR 

       190        200        210        220        230        240 
VHNQHGIPYP SYFHPYTSHE MMTWQNKMRQ SSRPHLFSFI GGPRRGVEKA AVRDELIRQC 

       250        260        270        280        290        300 
SESGRCKLLK CGKGPSKCHD PIEVLKVMSQ SQFCLQAPGD SFTRRSTFDS VLAGCIPVFF 

       310        320        330        340        350        360 
SPHTVYTQYE WFFPAGDARE YSVYIDENAL KTGNGSKRVV SIEEELFKIE REKVERMRSA 

       370        380        390        400 
VINLMPRLTY AHPNATDLGF QDAVDVALEA LWAKRLKLNV

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000337 Genomic DNA. Translation: EEE85257.1.
RefSeqXP_002300452.1. XM_002300416.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7459138.
KEGGpop:POPTR_176534.

Phylogenomic databases

OMAIKQCAES.
ProtClustDBCLSN2914585.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GHE5_POPTR
AccessionPrimary (citable) accession number: B9GHE5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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