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B9GFL5 (B9GFL5_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Cysteine synthase RuleBase RU003985
EC=2.5.1.47 RuleBase RU003985
Gene names
ORF Names:POPTRDRAFT_707666 EMBL EEE83668.1
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome]
Taxonomic identifier3694 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length424 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

O(3)-acetyl-L-serine + H2S = L-cysteine + acetate. RuleBase RU003985

Sequence similarities

Belongs to the cysteine synthase/cystathionine beta-synthase family. RuleBase RU003985

Sequences

Sequence LengthMass (Da)Tools
B9GFL5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: A5C474FA65EF7B3D

FASTA42445,496
        10         20         30         40         50         60 
MASVRTTGAF VAAISMSIVL FSYFLSNYRS KRKTPSPLSK NKKPRNGLIH AVGNTPLIRI 

        70         80         90        100        110        120 
NSLSEATGCE ILGKCEFLNP GGSVKDRVAV KIIEEALESG QLVCGGVVTE GSAGSTAISL 

       130        140        150        160        170        180 
ATVAPAYGCK CHVVIPDDVA IEKSQILEAL GATVERVRPV SITHRDHYVN IARRRALEAN 

       190        200        210        220        230        240 
ELASKLRKTE KIDGKVLEQI NGCISDGEKK GSIFSSYCSG GFFADQFENL ANFRAHYQGT 

       250        260        270        280        290        300 
GPEIWEQSGC SLDSFVAAAG TGGTVAGISS FLQEKNPNIK CFLIDPPGSG LFNKVTRGVM 

       310        320        330        340        350        360 
YTREEAEGKR LKNPFDTITE GIGINRLTQN FKMAKLDGAY RGTDKEAVEM SRYLLKNDGL 

       370        380        390        400        410        420 
FLGSSSAMNC VGAVRVAQSL GPGHTIVTIL CDSGMRHLSK FHDAQYLSEH GLTPTATGLE 


FLGI

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References

[1]"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)."
Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. expand/collapse author list , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.
Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nisqually.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CM000337 Genomic DNA. Translation: EEE83668.1.
RefSeqXP_002298863.1. XM_002298827.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB9GFL5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsPOPTR_0001s37570.1; POPTR_0001s37570.1; POPTR_0001s37570.
GeneID7485110.
KEGGpop:POPTR_707666.

Phylogenomic databases

GeneTreeEPGT00050000010054.
OMARVRPVSI.
PhylomeDBB9GFL5.
ProtClustDBPLN02356.

Family and domain databases

InterProIPR001216. Cys_synth_BS.
IPR001926. PyrdxlP-dep_enz_bsu.
[Graphical view]
KOK01738.
PfamPF00291. PALP. 1 hit.
[Graphical view]
SUPFAMSSF53686. PyrdxlP-dep_enz_bsu. 1 hit.
PROSITEPS00901. CYS_SYNTHASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9GFL5_POPTR
AccessionPrimary (citable) accession number: B9GFL5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info