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B9FP24

- B9FP24_ORYSJ

UniProt

B9FP24 - B9FP24_ORYSJ

Protein

SAGA-associated factor 11

Gene

OsJ_18181

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
  1. Functioni

    Keywords - Molecular functioni

    ActivatorUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    SAGA-associated factor 11UniRule annotation
    Gene namesi
    ORF Names:OsJ_18181Imported
    OrganismiOryza sativa subsp. japonica (Rice)Imported
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

    Organism-specific databases

    GrameneiB9FP24.

    Subcellular locationi

    Nucleus UniRule annotation

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-SubCell

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os05g28370.2.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the SGF11 family.UniRule annotation
    Contains 1 SGF11-type zinc finger.UniRule annotation

    Phylogenomic databases

    eggNOGiNOG271996.

    Family and domain databases

    InterProiIPR013246. SAGA_su_Sgf11.
    [Graphical view]
    PfamiPF08209. Sgf11. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9FP24-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNCGRPVAAG RFAPHLEKCM GKLHFQGRKA RTKTTRSSTA GRTRNNNGSA   50
    ASSYSPYSSP AIANRASLPN GVTDGSASVT GEDHSNHILP EP 92
    Length:92
    Mass (Da):9,667
    Last modified:March 24, 2009 - v1
    Checksum:iBCC3EE10FB343C80
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000142 Genomic DNA. Translation: EEE63369.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000142 Genomic DNA. Translation: EEE63369.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os05g28370.2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    Gramenei B9FP24.

    Phylogenomic databases

    eggNOGi NOG271996.

    Family and domain databases

    InterProi IPR013246. SAGA_su_Sgf11.
    [Graphical view ]
    Pfami PF08209. Sgf11. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. NipponbareImported.

    Entry informationi

    Entry nameiB9FP24_ORYSJ
    AccessioniPrimary (citable) accession number: B9FP24
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)