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B9EJX5 (B9EJX5_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Transcription initiation factor TFIID subunit 2 Ensembl ENSMUSP00000043733
Gene names
Name:Taf2 Ensembl ENSMUSP00000043733 EMBL AAI47639.1 MGI 2443028
OrganismMus musculus (Mouse) [Reference proteome] EMBL AAI47639.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length1198 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
B9EJX5 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 9FA604069E20829C

FASTA1,198136,926
        10         20         30         40         50         60 
MPPTGLESSR MNRKKGDKGF ESPRPYKLTH QVVCINNINF QRKSVVGFVE LTIFPTVANL 

        70         80         90        100        110        120 
NRIKLNSKQC RIYRVRINDL EAAFIYNDPT LEVCHSESKQ RNLNYFSNAY AAAVSAVDPD 

       130        140        150        160        170        180 
AGNGELCIKV PSELWKHVDE LKVLKIHINF SLDQPKGGLH FVVPSVEGSM AERGAHVFSC 

       190        200        210        220        230        240 
GYQNSTRFWF PCVDSYSELC TWKLEFTVDA AMVAVSNGDL VETVYTHDMR KKTFHYMLTI 

       250        260        270        280        290        300 
PTAASNISLA IGPFEILVDP YMHEVTHFCL PQLLPLLKHT TSYIHEVFEF YEEILTCRYP 

       310        320        330        340        350        360 
YSCFKTVFID EAYVEVAAYA SMSIFSTNLL HSAMIIDETP LTRRCLAQAL AQQFFGCFIS 

       370        380        390        400        410        420 
RMSWSDEWVL KGISGYIYGL WMKKTFGVNE YHHWIKEELD KIVAYELKTG GVLLHPIFGG 

       430        440        450        460        470        480 
GKEKDNPASH LHFSIKHPHT LSWEYYTMFQ CKAHLVMRLI ENRISMEFML QVFNKLLSLA 

       490        500        510        520        530        540 
STASSQKFQS HMWSQMLVST YGFLKSISNV SGKDIQPLIK QWVDQSGVVK FYGSFAFNRK 

       550        560        570        580        590        600 
RNVLELEIKQ DYTSPGTQKY VGPLKVTVQE LDGSFNHTLQ IEENSLKHDI PCHSKSRRNK 

       610        620        630        640        650        660 
KKKIPLMNGE EVDMDLSAMD ADSPLLWIRI DPDMSVLRKV EFEQADFMWQ YELRYERDVV 

       670        680        690        700        710        720 
AQQESILALE KFPTPASRLA LTDILEQEQC FYRVRMSACF CLAKIANSMV STWTGPPAMK 

       730        740        750        760        770        780 
SLFTRMFCCK TCPNIVKTNN FMSFQSYFLQ KTMPVAMALL RDVHNLCPKE VLTFILDLIK 

       790        800        810        820        830        840 
YNDNRKNKFS DNYYRAEMID ALANSVTPAV SVNNEVRTLD NLNPDVRLIL EEITRFLNME 

       850        860        870        880        890        900 
KLLPSYRHTI TVSCLRAIRV LQKNGHVPSD ASLFKSYAEY GHFVDIRIAA LEAVVDYTKV 

       910        920        930        940        950        960 
DRSYEELQWL LNMIQTDPVP YVRHKILNML TKNPPFTKNM ESPLCNEALV DQLWKLMNSG 

       970        980        990       1000       1010       1020 
TAHDWRLRCG AVDLYFTLFG LSRPSCLPLP ELGLVLNLKE KKAVLNPTII PEAGVGNQES 

      1030       1040       1050       1060       1070       1080 
ASNPGCHAQL AGFQNPFSSS QDEEEVDMDT VHDSQAFISH HLNMLERPST PGLSKYRPSG 

      1090       1100       1110       1120       1130       1140 
SRSSLMPQHS LGCDITPPTK PQWSMELSRK GAGKEQPLEM GVHSMVAAPL SMFAKEALSS 

      1150       1160       1170       1180       1190 
RHSEHHHHHH HEHKKKKKKH KHKHKHKHKH DSKDKDREPF AFSSPASGRS VRSPSLSD 

« Hide

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain EMBL AAI47639.1 and Testicle EMBL AAI51080.1.
[2]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000043733.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000043733.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC137950 Genomic DNA. No translation available.
BC147638 mRNA. Translation: AAI47639.1.
BC151079 mRNA. Translation: AAI51080.1.
RefSeqNP_001074757.1. NM_001081288.1.
UniGeneMm.380957.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000041733; ENSMUSP00000043733; ENSMUSG00000037343.
GeneID319944.
KEGGmmu:319944.
UCSCuc007vrt.1. mouse.

Organism-specific databases

CTD6873.
MGIMGI:2443028. Taf2.

Phylogenomic databases

GeneTreeENSGT00390000000420.
HOGENOMHOG000046103.
HOVERGENHBG094022.
KOK03128.
OMACHSESKQ.
OrthoDBEOG7R2BHS.
TreeFamTF315208.

Gene expression databases

GenevestigatorB9EJX5.

Family and domain databases

InterProIPR016024. ARM-type_fold.
IPR014782. Peptidase_M1_N.
[Graphical view]
PfamPF01433. Peptidase_M1. 1 hit.
[Graphical view]
SUPFAMSSF48371. SSF48371. 1 hit.
ProtoNetSearch...

Other

ChiTaRSTAF2. mouse.
NextBio395709.
SOURCESearch...

Entry information

Entry nameB9EJX5_MOUSE
AccessionPrimary (citable) accession number: B9EJX5
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)