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B9EIX0

- B9EIX0_MOUSE

UniProt

B9EIX0 - B9EIX0_MOUSE

Protein
Submitted name:

DCP1 decapping enzyme homolog b (S. cerevisiae)

Gene

Dcp1b

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DCP1 decapping enzyme homolog b (S. cerevisiae)Imported
    Submitted name:
    MCG131714Imported
    Submitted name:
    mRNA-decapping enzyme 1BImported
    Gene namesi
    Name:Dcp1bImported
    ORF Names:mCG_131714Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 6

    Organism-specific databases

    MGIiMGI:2442404. Dcp1b.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl
    2. intracellular membrane-bounded organelle Source: Ensembl

    Expressioni

    Gene expression databases

    GenevestigatoriB9EIX0.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000014855.
    HOVERGENiHBG103159.
    KOiK12611.
    OMAiDEYTKCK.
    OrthoDBiEOG75QR3K.
    TreeFamiTF320504.

    Family and domain databases

    Gene3Di2.30.29.30. 1 hit.
    InterProiIPR010334. DCP1.
    IPR011993. PH_like_dom.
    [Graphical view]
    PANTHERiPTHR16290. PTHR16290. 1 hit.
    PfamiPF06058. DCP1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9EIX0-1 [UniParc]FASTAAdd to Basket

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    MAAAAAGGLP GKGHDISLAA LRRHDPYISR IVDVASQVAL YTFGHRANEW    50
    EKTGVEGTLF VYTRSASPKH GFTIMNRLSM ENRTEPITKD LDFQLQNPFL 100
    LYRNGTLSIY GIWFYDKEEC QRIAKLMKNL TQSEQLKACH GAGSSPVTLS 150
    SGEGQEVDIL QMLTKAKDEY TKCKTCSEPK QMTNSSAICD NPKLIKPVPV 200
    RPSSSQRLQG PAPSKTSDPE PQHLSLTALF GKQDKAPCQE TVKPSRTFAH 250
    HHHHHHQQQQ ETRPVHHGVA CSLSCEEPRK LSLPVEKQLC PAIQKLMLGS 300
    PGLHPLPQHP EQWSCKSGSP SPAGGILPGP VQLGSPWNGR VAHCTQSTCR 350
    GHKLLEQLQG APGAVHKYNP CAPTGPAVAT QVAPGQSVAQ SQLVYFSGPL 400
    QPPAPGHQAL RKEQGALPAQ AVSLSGSQES SPTVLPTQEL LRKLQVVHQE 450
    QQAAPRPALA ARFPVSAQGS GTEKPLEAWV SKTASMEKQA PLLQSTCAPL 500
    RETDNGLMAL GGQELPAASS SLLLPLQNWE SSTVASRPLT RLQLQEALLN 550
    LIQNDDNFLS IIYEAYLFSV TQAAMRTT 578
    Length:578
    Mass (Da):62,693
    Last modified:March 24, 2009 - v1
    Checksum:i14045966F0B8B1CD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC115816 Genomic DNA. No translation available.
    AC126453 Genomic DNA. No translation available.
    BC141162 mRNA. Translation: AAI41163.1.
    CH466523 Genomic DNA. Translation: EDK99606.1.
    RefSeqiNP_001028551.2. NM_001033379.3.
    UniGeneiMm.250197.

    Genome annotation databases

    EnsembliENSMUST00000112777; ENSMUSP00000108397; ENSMUSG00000041477.
    GeneIDi319618.
    KEGGimmu:319618.
    UCSCiuc009dlx.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC115816 Genomic DNA. No translation available.
    AC126453 Genomic DNA. No translation available.
    BC141162 mRNA. Translation: AAI41163.1 .
    CH466523 Genomic DNA. Translation: EDK99606.1 .
    RefSeqi NP_001028551.2. NM_001033379.3.
    UniGenei Mm.250197.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000112777 ; ENSMUSP00000108397 ; ENSMUSG00000041477 .
    GeneIDi 319618.
    KEGGi mmu:319618.
    UCSCi uc009dlx.2. mouse.

    Organism-specific databases

    CTDi 196513.
    MGIi MGI:2442404. Dcp1b.

    Phylogenomic databases

    GeneTreei ENSGT00390000014855.
    HOVERGENi HBG103159.
    KOi K12611.
    OMAi DEYTKCK.
    OrthoDBi EOG75QR3K.
    TreeFami TF320504.

    Miscellaneous databases

    NextBioi 395096.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori B9EIX0.

    Family and domain databases

    Gene3Di 2.30.29.30. 1 hit.
    InterProi IPR010334. DCP1.
    IPR011993. PH_like_dom.
    [Graphical view ]
    PANTHERi PTHR16290. PTHR16290. 1 hit.
    Pfami PF06058. DCP1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: BrainImported.
    3. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    5. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiB9EIX0_MOUSE
    AccessioniPrimary (citable) accession number: B9EIX0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3