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B9DY93

- B9DY93_CLOK1

UniProt

B9DY93 - B9DY93_CLOK1

Protein

Elongation factor Tu

Gene

tuf

Organism
Clostridium kluyveri (strain NBRC 12016)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi81 – 855GTPUniRule annotation
    Nucleotide bindingi136 – 1394GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotation

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciCKLU583346:GJNQ-200-MONOMER.
    CKLU583346:GJNQ-214-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotation
    Ordered Locus Names:CKR_0167Imported, CKR_0181Imported
    OrganismiClostridium kluyveri (strain NBRC 12016)Imported
    Taxonomic identifieri583346 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000007969: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    PTM / Processingi

    Proteomic databases

    PRIDEiB9DY93.

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi583346.CKR_0181.

    Structurei

    3D structure databases

    ProteinModelPortaliB9DY93.
    SMRiB9DY93. Positions 2-397.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0050.
    HOGENOMiHOG000229290.
    KOiK02358.
    OrthoDBiEOG6R5C6X.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B9DY93-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKEKFERTK PHVNIGTIGH VDHGKTTLTA AITMVLAKEG KASATKYDEI    50
    DKAPEEKERG ITINTAHVEY ETEVRHYAHV DCPGHADYVK NMITGAAQMD 100
    GAILVVSAAD GPMPQTREHI LLASRVGVQY IVVFLNKSDQ VDDPELIELV 150
    EMEVRELLSE YGFPGDDVPI IVGSALKVIE NPEDAEATKC IYELMEAVDT 200
    YIPTPERPVD KPFLMPIEDV FTITGRGTVA TGRVESGVLK IGDEVEIVGL 250
    KEEKKKTVCT GVEMFRKLLD QAMAGDNIGA LLRGIQREEI ERGQVLSKPG 300
    SVKPHKKFVG QVYVLKKEEG GRHTPFFNGY RPQFYFRTTD VTGSISLPEG 350
    VEMVMPGDHI DMNVELITPV AMHEGLRFAI REGGRTVGSG VVTTVSE 397
    Length:397
    Mass (Da):43,675
    Last modified:March 24, 2009 - v1
    Checksum:iEEF83F11671FBADF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009049 Genomic DNA. Translation: BAH05218.1.
    AP009049 Genomic DNA. Translation: BAH05232.1.
    RefSeqiWP_011988788.1. NC_011837.1.
    YP_002470632.1. NC_011837.1.
    YP_002470646.1. NC_011837.1.

    Genome annotation databases

    EnsemblBacteriaiBAH05218; BAH05218; CKR_0167.
    BAH05232; BAH05232; CKR_0181.
    GeneIDi7273609.
    7274968.
    KEGGickr:CKR_0167.
    ckr:CKR_0181.
    PATRICi19469998. VBICloKlu118830_0258.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009049 Genomic DNA. Translation: BAH05218.1 .
    AP009049 Genomic DNA. Translation: BAH05232.1 .
    RefSeqi WP_011988788.1. NC_011837.1.
    YP_002470632.1. NC_011837.1.
    YP_002470646.1. NC_011837.1.

    3D structure databases

    ProteinModelPortali B9DY93.
    SMRi B9DY93. Positions 2-397.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 583346.CKR_0181.

    Proteomic databases

    PRIDEi B9DY93.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAH05218 ; BAH05218 ; CKR_0167 .
    BAH05232 ; BAH05232 ; CKR_0181 .
    GeneIDi 7273609.
    7274968.
    KEGGi ckr:CKR_0167.
    ckr:CKR_0181.
    PATRICi 19469998. VBICloKlu118830_0258.

    Phylogenomic databases

    eggNOGi COG0050.
    HOGENOMi HOG000229290.
    KOi K02358.
    OrthoDBi EOG6R5C6X.

    Enzyme and pathway databases

    BioCyci CKLU583346:GJNQ-200-MONOMER.
    CKLU583346:GJNQ-214-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Clostridium kluyveri and comaprative genomics of Clostridia species."
      Inui M., Nonaka H., Shinoda Y., Ikenaga Y., Abe M., Naito K., Vertes A.A., Yukawa H.
      Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: NBRC 12016Imported.
    2. "Complete genome sequence of Clostridium kluyveri and comparative genomics of Clostridia species."
      Inui M., Nonaka H., Shinoda Y., Ikenaga Y., Abe M., Naito K., Vertes A.A., Yukawa H.
      Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NBRC 12016Imported.

    Entry informationi

    Entry nameiB9DY93_CLOK1
    AccessioniPrimary (citable) accession number: B9DY93
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3