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B9DW76

- SYR_STRU0

UniProt

B9DW76 - SYR_STRU0

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Streptococcus uberis (strain ATCC BAA-854 / 0140J)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciSUBE218495:GJ7D-1826-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
    Alternative name(s):
    Arginyl-tRNA synthetaseUniRule annotation
    Short name:
    ArgRSUniRule annotation
    Gene namesi
    Name:argSUniRule annotation
    Ordered Locus Names:SUB1789
    OrganismiStreptococcus uberis (strain ATCC BAA-854 / 0140J)
    Taxonomic identifieri218495 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
    ProteomesiUP000000449: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 562562Arginine--tRNA ligasePRO_1000198939Add
    BLAST

    Proteomic databases

    PRIDEiB9DW76.

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi218495.SUB1789.

    Structurei

    3D structure databases

    ProteinModelPortaliB9DW76.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi121 – 13111"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0018.
    HOGENOMiHOG000247211.
    KOiK01887.
    OMAiYVKFHDE.
    OrthoDBiEOG6JB13C.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B9DW76-1 [UniParc]FASTAAdd to Basket

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    MDTKTLIAND IAKVVPELDQ ETIYNLLETP KNSDMGDVAF PAFSLAKVLR    50
    KAPQMIAGEL AEKIDAAQYE KVMAVGPYIN FFLDKSSISK EVLEAVIKEK 100
    ANYGQQHIGD GQNVTLDMSS PNIAKPFSVG HLRSTVIADA IGHIYSKLGY 150
    NSIRINHLGD WGKQFGMLIV AYKLWGDRAT VEANPIDELL KLYVRINAEA 200
    EENPELDEQA RQWFKKLEDG DKEAWDLWQW FRDESLVEFN RIYDKLDVSF 250
    DHFHGEAFYN DKMDEGIQIL EDKNLLKESK GAQIVDLEKY NLPPALIKKS 300
    DGATLYITRD MATAMYRQRT FNFVKNIYVV GQEQSHHFKQ LKAVLKEMGF 350
    DWSDDMIHVS FGLVTKNKKK LSTRKGNIIR LEPTLDEAVS RALTQIEAKN 400
    PDLENKEDVA HAVGVGAVKF YDLKTDRDNG YDFDLEAMVS FEGETGPYVQ 450
    YTYARIQSIL RKADFTPNEE TPYSLNDAES WEIIKLLQGF AANIERAAEK 500
    YDPSIIAKFA IQLAQSFNRY YAHTRILDES EERDSRLALC YATAVVLKES 550
    LRLLGVQAPE KM 562
    Length:562
    Mass (Da):63,982
    Last modified:March 24, 2009 - v1
    Checksum:iA4BF3D251F969E74
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM946015 Genomic DNA. Translation: CAR43791.1.
    RefSeqiWP_015912079.1. NC_012004.1.
    YP_002563061.1. NC_012004.1.

    Genome annotation databases

    EnsemblBacteriaiCAR43791; CAR43791; SUB1789.
    GeneIDi7393023.
    KEGGisub:SUB1789.
    PATRICi19809293. VBIStrUbe20775_1748.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM946015 Genomic DNA. Translation: CAR43791.1 .
    RefSeqi WP_015912079.1. NC_012004.1.
    YP_002563061.1. NC_012004.1.

    3D structure databases

    ProteinModelPortali B9DW76.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 218495.SUB1789.

    Proteomic databases

    PRIDEi B9DW76.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAR43791 ; CAR43791 ; SUB1789 .
    GeneIDi 7393023.
    KEGGi sub:SUB1789.
    PATRICi 19809293. VBIStrUbe20775_1748.

    Phylogenomic databases

    eggNOGi COG0018.
    HOGENOMi HOG000247211.
    KOi K01887.
    OMAi YVKFHDE.
    OrthoDBi EOG6JB13C.

    Enzyme and pathway databases

    BioCyci SUBE218495:GJ7D-1826-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
    PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 1 hit.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
    SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    SSF55190. SSF55190. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-854 / 0140J.

    Entry informationi

    Entry nameiSYR_STRU0
    AccessioniPrimary (citable) accession number: B9DW76
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3