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B9DU10 (B9DU10_STRU0) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SUB0537 EMBL CAR41297.1
OrganismStreptococcus uberis (strain ATCC BAA-854 / 0140J) [Complete proteome] [HAMAP] EMBL CAR41297.1
Taxonomic identifier218495 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length487 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B9DU10 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: 2F315C79EC62B990

FASTA48756,479
        10         20         30         40         50         60 
MTNELMFQAF EWYLPDDHNH WKRLREAIPD FQKMGISKIW LPPAFKGTGS NDVGYGIYDL 

        70         80         90        100        110        120 
FDLGEFDQNG TVPTKYGSKE DYLALTAALN EADIMPIADI VLNHKANADQ KETFHVLKMN 

       130        140        150        160        170        180 
PDNRQEPISE PYEIEGWTGF TFPGRQGKYN DFTWHWYHFT GLDYDARHNE TGIFLITGDN 

       190        200        210        220        230        240 
KGWANQESVD NEKGNFDYLM FNDIDFKHPE VQEHLKVWAK WFLDTTAVKG FRLDAIKHID 

       250        260        270        280        290        300 
ANFMNNFIRY VRDHFAEDLF VFGEYWKDDS DATHHYLDEV DMQFNLVDVA LHMNFYEASH 

       310        320        330        340        350        360 
SGNAFDMTKI FESSLMQSHP DFAITFVDNH DTQSGQALQT RVEDWFKPLA YGLILLRQEG 

       370        380        390        400        410        420 
MPCLFYGDYY GIEGDFGQMS FKDILEKLTY LRQKTVYGKQ VDYFDHANCI GWTQLGNDDS 

       430        440        450        460        470        480 
DTCLAVVMTN GDRGWKHMEV GQLYVGQTFV DYLGHCPDEI MINEDGWADF KVEPGSISAW 


VPKSFLA 

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References

[1]"Evidence for niche adaptation in the genome of the bovine pathogen Streptococcus uberis."
Ward P.N., Holden M.T.G., Leigh J.A., Lennard N., Bignell A., Barron A., Clark L., Quail M.A., Woodward J., Barrell B.G., Egan S.A., Field T.R., Maskell D., Kehoe M., Dowson C.G., Chanter N., Whatmore A.M., Bentley S.D., Parkhill J.
BMC Genomics 10:54-54(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-854 / 0140J.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM946015 Genomic DNA. Translation: CAR41297.1.
RefSeqYP_002561882.1. NC_012004.1.

3D structure databases

ProteinModelPortalB9DU10.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING218495.SUB0537.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAR41297; CAR41297; SUB0537.
GeneID7393054.
KEGGsub:SUB0537.
PATRIC19806776. VBIStrUbe20775_0509.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMAFNGTDYD.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycSUBE218495:GJ7D-579-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB9DU10_STRU0
AccessionPrimary (citable) accession number: B9DU10
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)