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Protein
Submitted name:

Putative alpha-amylase

Gene

SUB0537

Organism
Streptococcus uberis (strain ATCC BAA-854 / 0140J)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi103Calcium 1UniRule annotation1
Metal bindingi197Calcium 1UniRule annotation1
Metal bindingi203Calcium 1UniRule annotation1
Metal bindingi205Calcium 2UniRule annotation1
Active sitei234NucleophileUniRule annotation1
Metal bindingi238Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei264Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciSUBE218495:GJ7D-561-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative alpha-amylaseImported
Gene namesi
Ordered Locus Names:SUB0537Imported
OrganismiStreptococcus uberis (strain ATCC BAA-854 / 0140J)Imported
Taxonomic identifieri218495 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000000449 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi218495.SUB0537.

Structurei

3D structure databases

ProteinModelPortaliB9DU10.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 392AamyInterPro annotationAdd BLAST389

Phylogenomic databases

eggNOGiENOG4105E5K. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiPOG091H0HQ3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B9DU10-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNELMFQAF EWYLPDDHNH WKRLREAIPD FQKMGISKIW LPPAFKGTGS
60 70 80 90 100
NDVGYGIYDL FDLGEFDQNG TVPTKYGSKE DYLALTAALN EADIMPIADI
110 120 130 140 150
VLNHKANADQ KETFHVLKMN PDNRQEPISE PYEIEGWTGF TFPGRQGKYN
160 170 180 190 200
DFTWHWYHFT GLDYDARHNE TGIFLITGDN KGWANQESVD NEKGNFDYLM
210 220 230 240 250
FNDIDFKHPE VQEHLKVWAK WFLDTTAVKG FRLDAIKHID ANFMNNFIRY
260 270 280 290 300
VRDHFAEDLF VFGEYWKDDS DATHHYLDEV DMQFNLVDVA LHMNFYEASH
310 320 330 340 350
SGNAFDMTKI FESSLMQSHP DFAITFVDNH DTQSGQALQT RVEDWFKPLA
360 370 380 390 400
YGLILLRQEG MPCLFYGDYY GIEGDFGQMS FKDILEKLTY LRQKTVYGKQ
410 420 430 440 450
VDYFDHANCI GWTQLGNDDS DTCLAVVMTN GDRGWKHMEV GQLYVGQTFV
460 470 480
DYLGHCPDEI MINEDGWADF KVEPGSISAW VPKSFLA
Length:487
Mass (Da):56,479
Last modified:March 24, 2009 - v1
Checksum:i2F315C79EC62B990
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM946015 Genomic DNA. Translation: CAR41297.1.
RefSeqiWP_012658063.1. NC_012004.1.

Genome annotation databases

EnsemblBacteriaiCAR41297; CAR41297; SUB0537.
GeneIDi24162375.
KEGGisub:SUB0537.
PATRICi19806776. VBIStrUbe20775_0509.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM946015 Genomic DNA. Translation: CAR41297.1.
RefSeqiWP_012658063.1. NC_012004.1.

3D structure databases

ProteinModelPortaliB9DU10.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi218495.SUB0537.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR41297; CAR41297; SUB0537.
GeneIDi24162375.
KEGGisub:SUB0537.
PATRICi19806776. VBIStrUbe20775_0509.

Phylogenomic databases

eggNOGiENOG4105E5K. Bacteria.
COG0366. LUCA.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiPOG091H0HQ3.

Enzyme and pathway databases

BioCyciSUBE218495:GJ7D-561-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB9DU10_STRU0
AccessioniPrimary (citable) accession number: B9DU10
Entry historyiIntegrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: February 15, 2017
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.