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B9DNZ3

- B9DNZ3_STACT

UniProt

B9DNZ3 - B9DNZ3_STACT

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Protein

2-oxoglutarate dehydrogenase E1 component

Gene
odhA, Sca_1058, SCA_1058
Organism
Staphylococcus carnosus (strain TM300)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO2. It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3) By similarity.UniRule annotationSAAS annotations

Catalytic activityi

2-oxoglutarate + [dihydrolipoyllysine-residue succinyltransferase] lipoyllysine = [dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine + CO2.UniRule annotationSAAS annotations

Cofactori

Thiamine pyrophosphate By similarity.UniRule annotationSAAS annotations

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. glycolytic process Source: UniProtKB-KW
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

GlycolysisUniRule annotationSAAS annotations

Keywords - Ligandi

Thiamine pyrophosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciSCAR396513:GJ9G-1071-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
2-oxoglutarate dehydrogenase E1 componentUniRule annotation (EC:1.2.4.2UniRule annotation)
Alternative name(s):
Alpha-ketoglutarate dehydrogenase
Gene namesi
Name:odhAUniRule annotationImported
Ordered Locus Names:Sca_1058Imported
ORF Names:SCA_1058Imported
OrganismiStaphylococcus carnosus (strain TM300)
Taxonomic identifieri396513 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
ProteomesiUP000000444: Chromosome

Interactioni

Subunit structurei

Homodimer By similarity.UniRule annotationSAAS annotations

Protein-protein interaction databases

STRINGi396513.Sca_1058.

Structurei

3D structure databases

ProteinModelPortaliB9DNZ3.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiQHAPNKE.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
HAMAPiMF_01169. SucA_OdhA.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR023784. 2oxoglutarate_DH_E1_bac.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

B9DNZ3-1 [UniParc]FASTAAdd to Basket

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MTKDKQVSEA PVNFGANLGV IIDLYDQYLQ DPTSVSEDLQ ILFSTINNDN    50
REVAASPASS SSDSTIKQVM RLVDNIRQYG HLQSDIYPVN RPERKHVPKL 100
TIEDFNLSKD DLEKISPGIV SDHFSDIYDY AYEAIKRMEK RYKGPIAFEY 150
THINNNTERT WLKRRIETPY KADLNKNQKI NLFKTLAHVE GFEKYLHKNF 200
VGAKRFSIEG VDTLVPMLQE TLRRAAKEEI KNIQIGMAHR GRLNVLTHVL 250
EKPYEMMISE FMHTDPMKFL PEDGSLELTS GNAWTSDVKY HLGGIKTTDT 300
YGTEQRISLA NNPSHLEIVA PVVLGKTRSV QDDTHEGGKV QTDFSKSMPI 350
LIHGDAAYPG QGINFEAMNL GNLDGYSTGG SLHIITNNRI GFTTEARDGR 400
STTYSTDVAK GYDIPIMHVN ADNVEATIEA IDIAMDFRKE FNKDVVIDLV 450
GYRRYGHNEM DEPSITNPLP YHAIRKHPTV DKIYGEQLVD EGVISKEEME 500
QTLDDVQKEL RNSHDKIDKN DKTTTKDMSK PESVEEPLQP DKNNVSYDDL 550
KTINDALLTY PTGFEVLKKL NKVLEKRREP FEKEDGLVDW AQAEQLAFAT 600
IMQNGTPIRL TGQDSERGTF SHRHAVLHNP DNGDEYVPLQ NVPNQKASFD 650
VHNSPLSEAA VVGFEYGYNV ENKGTMNIWE AQYGDFANMA QMMFDNFLFS 700
SYAKWGERSG LTLFLPHSYE GQGPEHSSAR LERFLQLSAE NNSTVVNLSS 750
SANYYHLLRA QAASLDTDAM RPLVVMSPKS LLRNKTVADT IDKFTEGYFK 800
PILPEAHDEK KIKKLILASG KMFIDLKERL QKEPDESILL VAVERLYPFP 850
VEEVREVINS LPNLETIAWV QEEPQNQGAW SFVYPYLSDL ASDKYELQYS 900
GRIKRSAPAE GDGENHKLVQ NSIIEESLNK N 931
Length:931
Mass (Da):105,560
Last modified:March 24, 2009 - v1
Checksum:i5F7C559FD4DF1E5E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM295250 Genomic DNA. Translation: CAL27966.1.
RefSeqiYP_002634151.1. NC_012121.1.

Genome annotation databases

GeneIDi7551878.
KEGGisca:Sca_1058.
PATRICi19602884. VBIStaCar105558_1056.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM295250 Genomic DNA. Translation: CAL27966.1 .
RefSeqi YP_002634151.1. NC_012121.1.

3D structure databases

ProteinModelPortali B9DNZ3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 396513.Sca_1058.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7551878.
KEGGi sca:Sca_1058.
PATRICi 19602884. VBIStaCar105558_1056.

Phylogenomic databases

eggNOGi COG0567.
HOGENOMi HOG000259588.
KOi K00164.
OMAi QHAPNKE.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci SCAR396513:GJ9G-1071-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
HAMAPi MF_01169. SucA_OdhA.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR023784. 2oxoglutarate_DH_E1_bac.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome analysis of the meat starter culture bacterium Staphylococcus carnosus TM300."
    Rosenstein R., Nerz C., Biswas L., Resch A., Raddatz G., Schuster S.C., Goetz F.
    Appl. Environ. Microbiol. 75:811-822(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TM300Imported.

Entry informationi

Entry nameiB9DNZ3_STACT
AccessioniPrimary (citable) accession number: B9DNZ3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: June 11, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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