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B9DNP9

- EX7L_STACT

UniProt

B9DNP9 - EX7L_STACT

Protein

Exodeoxyribonuclease 7 large subunit

Gene

xseA

Organism
Staphylococcus carnosus (strain TM300)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotation

    Catalytic activityi

    Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation

    GO - Molecular functioni

    1. exodeoxyribonuclease VII activity Source: UniProtKB-HAMAP
    2. nucleic acid binding Source: InterPro

    Keywords - Molecular functioni

    Exonuclease, Hydrolase, Nuclease

    Enzyme and pathway databases

    BioCyciSCAR396513:GJ9G-1160-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Exodeoxyribonuclease 7 large subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
    Alternative name(s):
    Exodeoxyribonuclease VII large subunitUniRule annotation
    Short name:
    Exonuclease VII large subunitUniRule annotation
    Gene namesi
    Name:xseAUniRule annotation
    Ordered Locus Names:Sca_1147
    OrganismiStaphylococcus carnosus (strain TM300)
    Taxonomic identifieri396513 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcus
    ProteomesiUP000000444: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. exodeoxyribonuclease VII complex Source: InterPro

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 446446Exodeoxyribonuclease 7 large subunitPRO_1000200680Add
    BLAST

    Interactioni

    Subunit structurei

    Heterooligomer composed of large and small subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi396513.Sca_1147.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the XseA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1570.
    HOGENOMiHOG000229265.
    KOiK03601.
    OMAiDDRHKQA.
    OrthoDBiEOG64R65J.

    Family and domain databases

    HAMAPiMF_00378. Exonuc_7_L.
    InterProiIPR003753. Exonuc_VII_L.
    IPR020579. Exonuc_VII_lsu_C.
    IPR025824. OB-fold_nuc-bd_dom.
    [Graphical view]
    PfamiPF02601. Exonuc_VII_L. 1 hit.
    PF13742. tRNA_anti_2. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00237. xseA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B9DNP9-1 [UniParc]FASTAAdd to Basket

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    MSDYLSVTAL TKYIKYKFDQ DPHLQSVLLK GELSNFKKHS SGHLYFNLKD    50
    NNSVVNAMMF KAQANKLDFN PKEGDEVLIE ARVSVYERQG NYQIYVNKMH 100
    LDGIGNLYQK LEALKKELKK QGLFDTKHKK EIPRFPKKIA VLTASTGAAI 150
    RDIYSTINSR YPLVEQIQIS TLVQGKQAKD DIVNKIKYAD TLDADVMIVG 200
    RGGGSIEDLW NFNEEEVVRA IFEAKTPVIS AVGHETDFTL SDFVADVRAA 250
    TPTQAAVIAT PDQVELSQYI KQTELNLSRH IIQIINNKKK HLEHVASYYK 300
    FKQPSLLYDQ QIQKKDDFER QLNLSITTKL NNALQKVELL TNRINLKDLK 350
    QQTLQGIQSR LQLHDSLNKS IINIIDNSKK RLSQRIENLN SLSPSNTMLR 400
    GYTIVNKNEQ VITSTQSLEK NDEINLQMKD GTVDAIVKKV RCNHNE 446
    Length:446
    Mass (Da):50,866
    Last modified:March 24, 2009 - v1
    Checksum:i52F2B90424B5AF97
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM295250 Genomic DNA. Translation: CAL28055.1.
    RefSeqiWP_015900396.1. NC_012121.1.
    YP_002634240.1. NC_012121.1.

    Genome annotation databases

    GeneIDi7550459.
    KEGGisca:Sca_1147.
    PATRICi19603064. VBIStaCar105558_1146.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM295250 Genomic DNA. Translation: CAL28055.1 .
    RefSeqi WP_015900396.1. NC_012121.1.
    YP_002634240.1. NC_012121.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 396513.Sca_1147.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7550459.
    KEGGi sca:Sca_1147.
    PATRICi 19603064. VBIStaCar105558_1146.

    Phylogenomic databases

    eggNOGi COG1570.
    HOGENOMi HOG000229265.
    KOi K03601.
    OMAi DDRHKQA.
    OrthoDBi EOG64R65J.

    Enzyme and pathway databases

    BioCyci SCAR396513:GJ9G-1160-MONOMER.

    Family and domain databases

    HAMAPi MF_00378. Exonuc_7_L.
    InterProi IPR003753. Exonuc_VII_L.
    IPR020579. Exonuc_VII_lsu_C.
    IPR025824. OB-fold_nuc-bd_dom.
    [Graphical view ]
    Pfami PF02601. Exonuc_VII_L. 1 hit.
    PF13742. tRNA_anti_2. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00237. xseA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome analysis of the meat starter culture bacterium Staphylococcus carnosus TM300."
      Rosenstein R., Nerz C., Biswas L., Resch A., Raddatz G., Schuster S.C., Goetz F.
      Appl. Environ. Microbiol. 75:811-822(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TM300.

    Entry informationi

    Entry nameiEX7L_STACT
    AccessioniPrimary (citable) accession number: B9DNP9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3