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B9DGM7 (B9DGM7_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
AT5G14420 protein EMBL BAH19894.1
Gene names
Name:AT5G14420 EMBL BAH19894.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL BAH19894.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length468 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   DomainZinc-finger RuleBase RU000353
   LigandMetal-binding
Zinc
Gene Ontology (GO)
   Molecular functionzinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B9DGM7 [UniParc].

Last modified March 24, 2009. Version 1.
Checksum: C596D0DB89126113

FASTA46851,651
        10         20         30         40         50         60 
MGTGNSKENW RQSSFRSTSA SSASPSSSSW ASQQSYPQYG AESYNYPPPP SYAQPPEYTQ 

        70         80         90        100        110        120 
PPPPLYSTQP YSAPSYSAPP SQSYGSDNKK RLERKYSKIS DDYSSWEQVT EALARAGLES 

       130        140        150        160        170        180 
SNLIVGIDFT KSNEWTGARS FNRKSLHFIG SSPNPYEQAI TIIGRTLAAF DEDNLIPCYG 

       190        200        210        220        230        240 
FGDASTHDQD VFSFNSEDRF CNGFEEVLSR YKEIVPQLKL AGPTSFAPII DMAMTIVEQS 

       250        260        270        280        290        300 
GGQYHVLVII ADGQVTRSVD TENGQLSPQE QKTVDAIVQA SKLPLSIVLV GVGDGPWDMM 

       310        320        330        340        350        360 
REFDDNIPAR AFDNFQFVNF TEIMAKNKAQ SLKETEFALS ALMEIPQQYK ATIELNLLGR 

       370        380        390        400        410        420 
RNGYIPERFP LPPPMRGGSS SYNSPKPSRL PSFKPSVPPH PTEGYHVRSS PVPPPTSSAS 

       430        440        450        460 
DNQLCPICLS NPKDMAFGCG HQTCCECGPD LQMCPICRAP IQTRIKLY

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References

[1]"Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAs."
Iida K., Fukami-Kobayashi K., Toyoda A., Sakaki Y., Kobayashi M., Seki M., Shinozaki K.
DNA Res. 0:0-0(2009)
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Mixture of silique and flower EMBL BAH19894.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AK317211 mRNA. Translation: BAH19894.1.
IPIIPI00535253.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB9DGM7.

Proteomic databases

PRIDEB9DGM7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Gene expression databases

GenevestigatorB9DGM7.

Family and domain databases

InterProIPR010734. Copine.
IPR002035. VWF_A.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
Gene3DG3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
PfamPF07002. Copine. 1 hit.
[Graphical view]
SMARTSM00184. RING. 1 hit.
SM00327. VWA. 1 hit.
[Graphical view]
PROSITEPS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB9DGM7_ARATH
AccessionPrimary (citable) accession number: B9DGM7
Entry history
Integrated into UniProtKB/TrEMBL: March 24, 2009
Last sequence update: March 24, 2009
Last modified: November 16, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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