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Protein
Submitted name:

Attractin

Gene

atrn

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AttractinImported
Gene namesi
Name:atrnImported
Synonyms:si:dkey-259n11.1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 13

Organism-specific databases

ZFINiZDB-GENE-090312-21 atrn

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei1233 – 1257HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi71 ↔ 80PROSITE-ProRule annotation
Disulfide bondi201 ↔ 211PROSITE-ProRule annotation
Disulfide bondi205 ↔ 222PROSITE-ProRule annotation
Disulfide bondi224 ↔ 233PROSITE-ProRule annotation
Disulfide bondi259 ↔ 268PROSITE-ProRule annotation
Disulfide bondi1034 ↔ 1043PROSITE-ProRule annotation
Disulfide bondi1046 ↔ 1060PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotationSAAS annotation

Proteomic databases

PeptideAtlasiB8JI13

Expressioni

Gene expression databases

BgeeiENSDARG00000062164
ExpressionAtlasiB8JI13 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini49 – 81EGF-likeInterPro annotationAdd BLAST33
Domaini83 – 199CUBInterPro annotationAdd BLAST117
Domaini197 – 234EGF-likeInterPro annotationAdd BLAST38
Domaini235 – 269EGF-likeInterPro annotationAdd BLAST35
Domaini747 – 868C-type lectinInterPro annotationAdd BLAST122
Domaini1017 – 1062Laminin EGF-likeInterPro annotationAdd BLAST46
Domaini1063 – 1111Laminin EGF-likeInterPro annotationAdd BLAST49

Keywords - Domaini

EGF-like domainPROSITE-ProRule annotationSAAS annotation, Laminin EGF-like domainPROSITE-ProRule annotationSAAS annotation, RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG1388 Eukaryota
ENOG410XRW4 LUCA
GeneTreeiENSGT00390000001118
HOGENOMiHOG000231727
HOVERGENiHBG004312
PhylomeDBiB8JI13

Family and domain databases

CDDicd03597 CLECT_attractin_like, 1 hit
cd00041 CUB, 1 hit
Gene3Di2.120.10.80, 2 hits
2.60.120.290, 1 hit
3.10.100.10, 1 hit
InterProiView protein in InterPro
IPR034011 Attractin-like_CTLD
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
IPR000859 CUB_dom
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR015915 Kelch-typ_b-propeller
IPR006652 Kelch_1
IPR002049 Laminin_EGF
IPR002165 Plexin_repeat
IPR016201 PSI
IPR035914 Sperma_CUB_dom_sf
PfamiView protein in Pfam
PF00431 CUB, 1 hit
PF01344 Kelch_1, 1 hit
PF00059 Lectin_C, 1 hit
PF01437 PSI, 1 hit
SMARTiView protein in SMART
SM00034 CLECT, 1 hit
SM00042 CUB, 1 hit
SM00181 EGF, 4 hits
SM00180 EGF_Lam, 2 hits
SM00423 PSI, 5 hits
SUPFAMiSSF117281 SSF117281, 1 hit
SSF49854 SSF49854, 1 hit
SSF56436 SSF56436, 1 hit
PROSITEiView protein in PROSITE
PS50041 C_TYPE_LECTIN_2, 1 hit
PS01180 CUB, 1 hit
PS00022 EGF_1, 3 hits
PS01186 EGF_2, 2 hits
PS50026 EGF_3, 3 hits
PS01248 EGF_LAM_1, 1 hit
PS50027 EGF_LAM_2, 2 hits

Sequencei

Sequence statusi: Complete.

B8JI13-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAEVRRALG RGWSLTVGLA HVGLHGTALR SLLFITALSG LLRLPAATEA
60 70 80 90 100
KECDKPCLNG QCSAASGACV CETGWVGEQC QHCGGRFRLT GPSGYLSDGP
110 120 130 140 150
GNYKYKTKCT WLIEGQPNSI LRLRFEHFAT ECSWDHLYVY DGDSIYSPLL
160 170 180 190 200
AAFSGLIVPE SYSNETVPEV VAHSGFTLLH FFSDAAYNLT GFNISYRLNT
210 220 230 240 250
CPNNCSDRGE CRVGNSSESV QCVCEDGWKG EACDVPYCSS DCGFPLRGQC
260 270 280 290 300
HNSTKRCLCK PGWQGLDCSI TVPANVSFWT REEYSGYGLV RASHKAVVHE
310 320 330 340 350
DVMWVIGGHV FNYTHYQMVT AFNISSQSWM TLNRSVHSVT GRYGHSLSVH
360 370 380 390 400
EDKIYMYGGK IDSTGNVTSE LWVFHTRNQS WVLLSPRAKE QYAVVGHSAH
410 420 430 440 450
TVQLNPDGSE PVILVVFGHC PLYGYISQVQ QYNIVKNTWS VLETRGALVQ
460 470 480 490 500
GGYGHSSVYD PQTRSIYIHG GYKAFTANKY GLAGDLYRYD VDERKWLILR
510 520 530 540 550
DSGFFRYLHT AVIAGGNILV FGGNTHNDTS MSHGAKCFSS DFIAYNLACD
560 570 580 590 600
EWTVLPNPDL YHDVNRFGHS AVYHNGVMYV YGGFNSLMLG DVLRFTPASC
610 620 630 640 650
AAFSEHLECV TAVPGVKCVW NSSTSTCVPW DAAALLDMEA LRNTCSPRGY
660 670 680 690 700
ADGEKCEQYS DCYSCTANTN SCQWCSTLCV SSHSNCTSSP GGIMEYEACP
710 720 730 740 750
KDNPSSVCSK RTSCKSCATD QNCQWETRNQ ECTTLPGNIC GESWHLVGNS
760 770 780 790 800
CLKLMTAKDS YDNAKLVCRN QQAVLASLTT QKKVQFVLKE MHNRSLQSKA
810 820 830 840 850
VITPWVGLRK INVSYWCWED MSPFTNSTLQ WLPGEPSDAG FCGYLAEPTF
860 870 880 890 900
NGLKAATCVN SVNGSLCERP TNHSVKQCRT PCALRSSCSE CTSGSSECMW
910 920 930 940 950
CSNMRQCVDS NAYVPSFPYG QCMEWYTMNS CPPENCSGYK TCGHCLDQPG
960 970 980 990 1000
CGWCTDPSNT GRGQCIEGSY RGPVQTLFHA PSTSGPSILP APQPMLNVSL
1010 1020 1030 1040 1050
CPVEGNYNWS FIQCPACQCN GHSSCVNESV CERCEDLTTG KQCESCISGY
1060 1070 1080 1090 1100
YGDPTNGGSC QPCKCNGHAS MCNSNNGKCF CTTKGIKGDR CHVCEVENRY
1110 1120 1130 1140 1150
QGNPLKGTCY YTLLIDYQFT FSLSQEDDRY YTAINFVATP DEQNRDLDMF
1160 1170 1180 1190 1200
INASKNFNLN ITWATSFAAG TQAGEEIPIV SRSNIKEFKD SFSNEKFDFR
1210 1220 1230 1240 1250
SNTNITFYVY VSNFTWPIKI QIAFSQHSNF MDLVQFFVTF FSCFLSLLLV
1260 1270 1280 1290 1300
AAVVWKIKQS CWASRRREQL LREMQQMASR PFATINVALE TDEEPPDLIG
1310 1320 1330 1340
GNVKSVPKPI ALEPCFGNKA AVLSIFVRLP RGPGGIPPPG QSVWQ
Length:1,345
Mass (Da):148,654
Last modified:March 3, 2009 - v1
Checksum:i925BB0555FB777F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR388098 Genomic DNA No translation available.
CR589874 Genomic DNA No translation available.
CT583702 Genomic DNA No translation available.
RefSeqiNP_001139087.1, NM_001145615.1
UniGeneiDr.81745

Genome annotation databases

EnsembliENSDART00000131875; ENSDARP00000118575; ENSDARG00000062164
GeneIDi794975

Entry informationi

Entry nameiB8JI13_DANRE
AccessioniPrimary (citable) accession number: B8JI13
Entry historyiIntegrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 23, 2018
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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