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B8JEG0

- B8JEG0_ANAD2

UniProt

B8JEG0 - B8JEG0_ANAD2

Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

A2cp1_0935

Organism
Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciADEH455488:GH35-940-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase D, 3'-phosphoesterase domain proteinImported
    Gene namesi
    Ordered Locus Names:A2cp1_0935Imported
    OrganismiAnaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)Imported
    Taxonomic identifieri455488 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
    ProteomesiUP000007089: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi455488.A2cp1_0935.

    Structurei

    3D structure databases

    ProteinModelPortaliB8JEG0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiMAIEVED.
    OrthoDBiEOG661H49.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR014144. LigD_PE_domain.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B8JEG0-1 [UniParc]FASTAAdd to Basket

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    MPDRLERYRA MRDPGRTPEP FGGGAPGEDG SGSARAFVVQ KHAARRLHWD    50
    FRLELGGTLR SWAVPKGPSA DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY 100
    GAGAVIVWDR GAWWPVGDPE DGLARGKLVF RLRGHKLRGE WTLVRTRAGD 150
    GGKRQWLLLK HRGDPFAGPG RPFPEASVLS GRTVEELAAG TSRAEAAARE 200
    AARLGAPARP LPRRGPAPMA PGARRAPFDR AGWLFEVAQG GQRVSARREG 250
    TGAVLRSPQG EDLGPRFPEV ALAVALLPGD PVLDGELVVL DDEGRASAEA 300
    LEARARTGAS AAAGAALQRP ATLFAFDLLA LGGRDLRALA LADRKRLLAE 350
    VAPAVGSVRF AGHVEREGKA LHREAADRGL PGVLARRAAA PYRSGRSADW 400
    VLVPAARSAA PRPPAPRPRG DAPAATGAVP VERTVNVVHP EKVWFPEDGI 450
    TKGELVAYHR AIAPFMLPYL ADRPLVLTRF PEGIHGRSFL QEDAPAWRPR 500
    WLRAATVHAG EGGRTLDHLL VDDADGLAWL VDQGAIPLDV LAGRAGALER 550
    PDWCVLELDA GDAPFAQGVR VARALHALCD AAGLPSHVKT TGERGLHVLV 600
    PLGGQLTHAQ ARTLAELLAR TVEAELPDLA TTARTAAARG GRVHVDALRN 650
    GHGTAIAAPY TVRPRPGAPV STPLRWSEVN ARLDPARFTV RTVPARVARL 700
    GRDPLGPVLT ERPDLLRALA RLRARPGAVG CGRPARSAPF VTRRTPGDAT 750
    RRRARRLVVP ARMWGQVAEP RPGGDFAAMC RPTRNRSRQ 789
    Length:789
    Mass (Da):84,500
    Last modified:March 3, 2009 - v1
    Checksum:iE4E05BE9463E1611
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001359 Genomic DNA. Translation: ACL64286.1.
    RefSeqiYP_002491352.1. NC_011891.1.

    Genome annotation databases

    EnsemblBacteriaiACL64286; ACL64286; A2cp1_0935.
    GeneIDi7298605.
    KEGGiacp:A2cp1_0935.
    PATRICi20908730. VBIAnaDeh28364_0967.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001359 Genomic DNA. Translation: ACL64286.1 .
    RefSeqi YP_002491352.1. NC_011891.1.

    3D structure databases

    ProteinModelPortali B8JEG0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 455488.A2cp1_0935.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACL64286 ; ACL64286 ; A2cp1_0935 .
    GeneIDi 7298605.
    KEGGi acp:A2cp1_0935.
    PATRICi 20908730. VBIAnaDeh28364_0967.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi MAIEVED.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci ADEH455488:GH35-940-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014144. LigD_PE_domain.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Anaeromyxobacter dehalogenans 2CP-1."
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Beliaev A.S., Richardson P.
      Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2CP-1 / ATCC BAA-258Imported.

    Entry informationi

    Entry nameiB8JEG0_ANAD2
    AccessioniPrimary (citable) accession number: B8JEG0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3