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Protein
Submitted name:

Alpha amylase catalytic region

Gene

A2cp1_4291

Organism
Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciADEH455488:GH35-4347-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:A2cp1_4291Imported
OrganismiAnaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)Imported
Taxonomic identifieri455488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
ProteomesiUP000007089: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4343 PotentialImportedAdd
BLAST
Chaini44 – 528485 PotentialImportedPRO_5000432797Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi455488.A2cp1_4291.

Structurei

3D structure databases

ProteinModelPortaliB8JBK0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000072331.
KOiK01176.
OMAiRIDTIGW.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B8JBK0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPPMPFAPRR RRATLAALVP CLAALALAAC APRAPAGPPA GAAAATALAG
60 70 80 90 100
APPRPLPPRP WQDEVLYFVL VDRFADGDRG NDRDVDLAGK GTFHGGDLRG
110 120 130 140 150
LTAQLDEIAA LGVTAIWVNP LVRNIPGYVS GAGFPDWAYH GYWMDDLSRL
160 170 180 190 200
DPRFGDEAEL AAFVNACHAR GLRVLLDVVY NHAGYDSAYL RDPRTRPWLR
210 220 230 240 250
NNVVGDCGDD DLTSCLAGLP DWKTELPEVR EFLLAAQLGW AKRSGVDGFR
260 270 280 290 300
LDTVKHVEPA FWELHRRRVR AELVPGFFLL GELWGGDRES LDPYFAADTL
310 320 330 340 350
DAGLDFGFQG STVGWLLGRG RTIAYERYLA SRHKVRAGHL LAQYLSSHDQ
360 370 380 390 400
PGALHLLGGD RALFRLAALL QLTTVGIPTV YYGEEVARPI GEWPDNRSDM
410 420 430 440 450
PWGQRDVLPG AGKPRDEAMR AFYQRVIALR RAHPALSRGT HAPLSTDGDG
460 470 480 490 500
LVFLRRDGDD AVVVAVNRGN SPLSLRIPVP AGWEGRDLED ALEGGAISVG
510 520
DGRMTLELPG RAARVVVPKP APGAAIRR
Length:528
Mass (Da):57,380
Last modified:March 3, 2009 - v1
Checksum:iEA311C11B2840137
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001359 Genomic DNA. Translation: ACL67608.1.
RefSeqiYP_002494674.1. NC_011891.1.

Genome annotation databases

EnsemblBacteriaiACL67608; ACL67608; A2cp1_4291.
GeneIDi7298366.
KEGGiacp:A2cp1_4291.
PATRICi20915540. VBIAnaDeh28364_4328.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001359 Genomic DNA. Translation: ACL67608.1.
RefSeqiYP_002494674.1. NC_011891.1.

3D structure databases

ProteinModelPortaliB8JBK0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi455488.A2cp1_4291.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL67608; ACL67608; A2cp1_4291.
GeneIDi7298366.
KEGGiacp:A2cp1_4291.
PATRICi20915540. VBIAnaDeh28364_4328.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000072331.
KOiK01176.
OMAiRIDTIGW.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciADEH455488:GH35-4347-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Anaeromyxobacter dehalogenans 2CP-1."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Beliaev A.S., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 2CP-1 / ATCC BAA-258Imported.

Entry informationi

Entry nameiB8JBK0_ANAD2
AccessioniPrimary (citable) accession number: B8JBK0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 7, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.