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B8J4J1 (B8J4J1_DESDA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length178 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ACL48449.1
Chain26 – 178153 Potential EMBL ACL48449.1
PRO_5000432203

Sequences

Sequence LengthMass (Da)Tools
B8J4J1 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 05605078B9F00465

FASTA17818,041
        10         20         30         40         50         60 
MKKILLALSF VCCALWIGAG VAQADSVKVP VNKITDEGVG EAIGFITFAD DGKGGVDVLV 

        70         80         90        100        110        120 
DVIGISEGEH GMHVHENPSC APAEKDGKKV AGLAAGGHFD PDKTGRHEGP GKHGHKGDLP 

       130        140        150        160        170 
AINADAKGAV SAKLHAPNLS VKDLKGRSIM IHAGGDNYSD QPAPLGGGGA RIACGVIE 

« Hide

References

[1]"Complete sequence of Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Lu M., Kiss H., Meineke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Ovchinnikova G., Hazen T.C.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27774 / DSM 6949.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001358 Genomic DNA. Translation: ACL48449.1.
RefSeqYP_002479127.1. NC_011883.1.

3D structure databases

ProteinModelPortalB8J4J1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING525146.Ddes_0538.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL48449; ACL48449; Ddes_0538.
GeneID7284205.
KEGGdds:Ddes_0538.
PATRIC21734496. VBIDesDes50650_0622.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2032.
HOGENOMHOG000263449.
KOK04565.
OrthoDBEOG6K13RS.

Enzyme and pathway databases

BioCycDDES525146:GIWF-554-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperone.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SSF49329. 1 hit.
PROSITEPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8J4J1_DESDA
AccessionPrimary (citable) accession number: B8J4J1
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)