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B8J3R0

- B8J3R0_DESDA

UniProt

B8J3R0 - B8J3R0_DESDA

Protein
Submitted name:

Carbon-monoxide dehydrogenase, catalytic subunit

Gene

Ddes_0382

Organism
Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (03 Mar 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4 iron, 4 sulfur cluster binding Source: InterPro
    2. carbon-monoxide dehydrogenase (acceptor) activity Source: UniProtKB-EC
    3. nickel cation binding Source: InterPro

    GO - Biological processi

    1. generation of precursor metabolites and energy Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseSAAS annotationImported

    Enzyme and pathway databases

    BioCyciDDES525146:GIWF-394-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Carbon-monoxide dehydrogenase, catalytic subunitImported (EC:1.2.99.2Imported)
    Gene namesi
    Ordered Locus Names:Ddes_0382Imported
    OrganismiDesulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949)Imported
    Taxonomic identifieri525146 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
    ProteomesiUP000002598: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi525146.Ddes_0382.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1151.
    HOGENOMiHOG000228918.
    KOiK00198.
    OrthoDBiEOG6RNQ8R.

    Family and domain databases

    Gene3Di1.20.1270.30. 1 hit.
    3.40.50.2030. 2 hits.
    InterProiIPR016101. CO_DH_a-bundle.
    IPR010047. CODH.
    IPR004137. HCP/CODH.
    IPR011254. Prismane-like.
    IPR016099. Prismane-like_a/b-sand.
    [Graphical view]
    PfamiPF03063. Prismane. 1 hit.
    [Graphical view]
    PIRSFiPIRSF005023. CODH. 1 hit.
    SUPFAMiSSF56821. SSF56821. 1 hit.
    TIGRFAMsiTIGR01702. CO_DH_cata. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B8J3R0-1 [UniParc]FASTAAdd to Basket

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    MDDRQTDINN MSIWEDAQKM LHKARAEGIE TAWDRLAQQT PHCRFCELGT    50
    TCRNCVMGPC RISAKAAPGG KLSRGVCGAD AHVIVARNFG RFIAGGSAGH 100
    SDHGRDVIET LEAVVEGKAE GYEIRDPAKL LRIAGELGIA VDGLAVNEVA 150
    ALVVDACYSD FGSRRGAVNF ISRVPAKRRQ VWEKLGITPR GVDREIAEMM 200
    HRTHMGCDND APNTMLHAAR CALSDGWAGS MIATELCDIL FGTPSPRMST 250
    VNLGVIKKET VNILVHGHNP VVSEMILAVS REPEVLEQAR QAGAAGITVA 300
    GLCCTGNELL MRQGIPMAGN HLMTELAIVT GAVEAVVVDY QCIMPSLVQV 350
    AACYHTRFID TAPKARFTGA VHMNFTPENA RQEASAILHM AIEAFAARDP 400
    GRVDIPVSPV NIMTGFSNEA ILEALGGSLD PLLDAVKAGT VRGFAAVVGC 450
    NNPKVRQDSA NVGIIKELIK KDIMVLVTGC ITTAAGKAGL LLPEGAAMAG 500
    PGLQKLCASL GIPPVLHMGS CVDNARIMHL CGLIANSLGV DISDLPVVAS 550
    APEWYSEKAA AIGLYAVASG VYTHLGLPPN ILGSDVVTDI ALNGLEGLVG 600
    ASFVVEADPV KAADLLDRRI RTKRSALGLD A 631
    Length:631
    Mass (Da):66,614
    Last modified:March 3, 2009 - v1
    Checksum:iB2E9C4CEEA0ADAE2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001358 Genomic DNA. Translation: ACL48295.1.
    RefSeqiYP_002478973.1. NC_011883.1.

    Genome annotation databases

    EnsemblBacteriaiACL48295; ACL48295; Ddes_0382.
    GeneIDi7284045.
    KEGGidds:Ddes_0382.
    PATRICi21734142. VBIDesDes50650_0449.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001358 Genomic DNA. Translation: ACL48295.1 .
    RefSeqi YP_002478973.1. NC_011883.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 525146.Ddes_0382.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACL48295 ; ACL48295 ; Ddes_0382 .
    GeneIDi 7284045.
    KEGGi dds:Ddes_0382.
    PATRICi 21734142. VBIDesDes50650_0449.

    Phylogenomic databases

    eggNOGi COG1151.
    HOGENOMi HOG000228918.
    KOi K00198.
    OrthoDBi EOG6RNQ8R.

    Enzyme and pathway databases

    BioCyci DDES525146:GIWF-394-MONOMER.

    Family and domain databases

    Gene3Di 1.20.1270.30. 1 hit.
    3.40.50.2030. 2 hits.
    InterProi IPR016101. CO_DH_a-bundle.
    IPR010047. CODH.
    IPR004137. HCP/CODH.
    IPR011254. Prismane-like.
    IPR016099. Prismane-like_a/b-sand.
    [Graphical view ]
    Pfami PF03063. Prismane. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF005023. CODH. 1 hit.
    SUPFAMi SSF56821. SSF56821. 1 hit.
    TIGRFAMsi TIGR01702. CO_DH_cata. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Lu M., Kiss H., Meineke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L.
      , Kyrpides N., Ovchinnikova G., Hazen T.C.
      Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27774 / DSM 6949Imported.

    Entry informationi

    Entry nameiB8J3R0_DESDA
    AccessioniPrimary (citable) accession number: B8J3R0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 3, 2009
    Last sequence update: March 3, 2009
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3