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B8J3R0 (B8J3R0_DESDA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length631 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B8J3R0 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: B2E9C4CEEA0ADAE2

FASTA63166,614
        10         20         30         40         50         60 
MDDRQTDINN MSIWEDAQKM LHKARAEGIE TAWDRLAQQT PHCRFCELGT TCRNCVMGPC 

        70         80         90        100        110        120 
RISAKAAPGG KLSRGVCGAD AHVIVARNFG RFIAGGSAGH SDHGRDVIET LEAVVEGKAE 

       130        140        150        160        170        180 
GYEIRDPAKL LRIAGELGIA VDGLAVNEVA ALVVDACYSD FGSRRGAVNF ISRVPAKRRQ 

       190        200        210        220        230        240 
VWEKLGITPR GVDREIAEMM HRTHMGCDND APNTMLHAAR CALSDGWAGS MIATELCDIL 

       250        260        270        280        290        300 
FGTPSPRMST VNLGVIKKET VNILVHGHNP VVSEMILAVS REPEVLEQAR QAGAAGITVA 

       310        320        330        340        350        360 
GLCCTGNELL MRQGIPMAGN HLMTELAIVT GAVEAVVVDY QCIMPSLVQV AACYHTRFID 

       370        380        390        400        410        420 
TAPKARFTGA VHMNFTPENA RQEASAILHM AIEAFAARDP GRVDIPVSPV NIMTGFSNEA 

       430        440        450        460        470        480 
ILEALGGSLD PLLDAVKAGT VRGFAAVVGC NNPKVRQDSA NVGIIKELIK KDIMVLVTGC 

       490        500        510        520        530        540 
ITTAAGKAGL LLPEGAAMAG PGLQKLCASL GIPPVLHMGS CVDNARIMHL CGLIANSLGV 

       550        560        570        580        590        600 
DISDLPVVAS APEWYSEKAA AIGLYAVASG VYTHLGLPPN ILGSDVVTDI ALNGLEGLVG 

       610        620        630 
ASFVVEADPV KAADLLDRRI RTKRSALGLD A 

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References

[1]"Complete sequence of Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Lu M., Kiss H., Meineke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Ovchinnikova G., Hazen T.C.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27774 / DSM 6949.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001358 Genomic DNA. Translation: ACL48295.1.
RefSeqYP_002478973.1. NC_011883.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING525146.Ddes_0382.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL48295; ACL48295; Ddes_0382.
GeneID7284045.
KEGGdds:Ddes_0382.
PATRIC21734142. VBIDesDes50650_0449.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1151.
HOGENOMHOG000228918.
KOK00198.
OrthoDBEOG6RNQ8R.
ProtClustDBCLSK862738.

Enzyme and pathway databases

BioCycDDES525146:GIWF-394-MONOMER.

Family and domain databases

Gene3D1.20.1270.30. 1 hit.
3.40.50.2030. 2 hits.
InterProIPR016101. CO_DH_a-bundle.
IPR010047. CODH.
IPR004137. HCP/CODH.
IPR011254. Prismane-like.
IPR016099. Prismane-like_a/b-sand.
[Graphical view]
PfamPF03063. Prismane. 1 hit.
[Graphical view]
PIRSFPIRSF005023. CODH. 1 hit.
SUPFAMSSF56821. SSF56821. 1 hit.
TIGRFAMsTIGR01702. CO_DH_cata. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8J3R0_DESDA
AccessionPrimary (citable) accession number: B8J3R0
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: November 13, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)