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B8J3R0

- B8J3R0_DESDA

UniProt

B8J3R0 - B8J3R0_DESDA

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Protein
Submitted name: Carbon-monoxide dehydrogenase, catalytic subunit
Gene
Ddes_0382
Organism
Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. 4 iron, 4 sulfur cluster binding Source: InterPro
  2. carbon-monoxide dehydrogenase (acceptor) activity Source: UniProtKB-EC
  3. nickel cation binding Source: InterPro

GO - Biological processi

  1. generation of precursor metabolites and energy Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseSAAS annotationsImported

Enzyme and pathway databases

BioCyciDDES525146:GIWF-394-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Carbon-monoxide dehydrogenase, catalytic subunitImported (EC:1.2.99.2Imported)
Gene namesi
Ordered Locus Names:Ddes_0382Imported
OrganismiDesulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949)Imported
Taxonomic identifieri525146 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000002598: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi525146.Ddes_0382.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1151.
HOGENOMiHOG000228918.
KOiK00198.
OrthoDBiEOG6RNQ8R.

Family and domain databases

Gene3Di1.20.1270.30. 1 hit.
3.40.50.2030. 2 hits.
InterProiIPR016101. CO_DH_a-bundle.
IPR010047. CODH.
IPR004137. HCP/CODH.
IPR011254. Prismane-like.
IPR016099. Prismane-like_a/b-sand.
[Graphical view]
PfamiPF03063. Prismane. 1 hit.
[Graphical view]
PIRSFiPIRSF005023. CODH. 1 hit.
SUPFAMiSSF56821. SSF56821. 1 hit.
TIGRFAMsiTIGR01702. CO_DH_cata. 1 hit.

Sequencei

Sequence statusi: Complete.

B8J3R0-1 [UniParc]FASTAAdd to Basket

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MDDRQTDINN MSIWEDAQKM LHKARAEGIE TAWDRLAQQT PHCRFCELGT    50
TCRNCVMGPC RISAKAAPGG KLSRGVCGAD AHVIVARNFG RFIAGGSAGH 100
SDHGRDVIET LEAVVEGKAE GYEIRDPAKL LRIAGELGIA VDGLAVNEVA 150
ALVVDACYSD FGSRRGAVNF ISRVPAKRRQ VWEKLGITPR GVDREIAEMM 200
HRTHMGCDND APNTMLHAAR CALSDGWAGS MIATELCDIL FGTPSPRMST 250
VNLGVIKKET VNILVHGHNP VVSEMILAVS REPEVLEQAR QAGAAGITVA 300
GLCCTGNELL MRQGIPMAGN HLMTELAIVT GAVEAVVVDY QCIMPSLVQV 350
AACYHTRFID TAPKARFTGA VHMNFTPENA RQEASAILHM AIEAFAARDP 400
GRVDIPVSPV NIMTGFSNEA ILEALGGSLD PLLDAVKAGT VRGFAAVVGC 450
NNPKVRQDSA NVGIIKELIK KDIMVLVTGC ITTAAGKAGL LLPEGAAMAG 500
PGLQKLCASL GIPPVLHMGS CVDNARIMHL CGLIANSLGV DISDLPVVAS 550
APEWYSEKAA AIGLYAVASG VYTHLGLPPN ILGSDVVTDI ALNGLEGLVG 600
ASFVVEADPV KAADLLDRRI RTKRSALGLD A 631
Length:631
Mass (Da):66,614
Last modified:March 3, 2009 - v1
Checksum:iB2E9C4CEEA0ADAE2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001358 Genomic DNA. Translation: ACL48295.1.
RefSeqiYP_002478973.1. NC_011883.1.

Genome annotation databases

EnsemblBacteriaiACL48295; ACL48295; Ddes_0382.
GeneIDi7284045.
KEGGidds:Ddes_0382.
PATRICi21734142. VBIDesDes50650_0449.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001358 Genomic DNA. Translation: ACL48295.1 .
RefSeqi YP_002478973.1. NC_011883.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 525146.Ddes_0382.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACL48295 ; ACL48295 ; Ddes_0382 .
GeneIDi 7284045.
KEGGi dds:Ddes_0382.
PATRICi 21734142. VBIDesDes50650_0449.

Phylogenomic databases

eggNOGi COG1151.
HOGENOMi HOG000228918.
KOi K00198.
OrthoDBi EOG6RNQ8R.

Enzyme and pathway databases

BioCyci DDES525146:GIWF-394-MONOMER.

Family and domain databases

Gene3Di 1.20.1270.30. 1 hit.
3.40.50.2030. 2 hits.
InterProi IPR016101. CO_DH_a-bundle.
IPR010047. CODH.
IPR004137. HCP/CODH.
IPR011254. Prismane-like.
IPR016099. Prismane-like_a/b-sand.
[Graphical view ]
Pfami PF03063. Prismane. 1 hit.
[Graphical view ]
PIRSFi PIRSF005023. CODH. 1 hit.
SUPFAMi SSF56821. SSF56821. 1 hit.
TIGRFAMsi TIGR01702. CO_DH_cata. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Lu M., Kiss H., Meineke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L.
    , Kyrpides N., Ovchinnikova G., Hazen T.C.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27774 / DSM 6949.

Entry informationi

Entry nameiB8J3R0_DESDA
AccessioniPrimary (citable) accession number: B8J3R0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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