B8J3R0 (B8J3R0_DESDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbon-monoxide dehydrogenase, catalytic subunit EMBL ACL48295.1
EC=1.2.99.2 EMBL ACL48295.1

Gene names

Ordered Locus Names:

Ddes_0382

Organism

Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) [Complete proteome] [HAMAP] EMBL ACL48295.1

Taxonomic identifier

525146 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio › Desulfovibrio desulfuricans › Desulfovibrio desulfuricans subsp. desulfuricans

Protein attributes

Sequence length	631 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase SAAS SAAS004137 EMBL ACL48295.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	generation of precursor metabolites and energy Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro carbon-monoxide dehydrogenase (acceptor) activity Inferred from electronic annotation. Source: EC nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8J3R0 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: B2E9C4CEEA0ADAE2	FASTA	631	66,614
	10 20 30 40 50 60 MDDRQTDINN MSIWEDAQKM LHKARAEGIE TAWDRLAQQT PHCRFCELGT TCRNCVMGPC 70 80 90 100 110 120 RISAKAAPGG KLSRGVCGAD AHVIVARNFG RFIAGGSAGH SDHGRDVIET LEAVVEGKAE 130 140 150 160 170 180 GYEIRDPAKL LRIAGELGIA VDGLAVNEVA ALVVDACYSD FGSRRGAVNF ISRVPAKRRQ 190 200 210 220 230 240 VWEKLGITPR GVDREIAEMM HRTHMGCDND APNTMLHAAR CALSDGWAGS MIATELCDIL 250 260 270 280 290 300 FGTPSPRMST VNLGVIKKET VNILVHGHNP VVSEMILAVS REPEVLEQAR QAGAAGITVA 310 320 330 340 350 360 GLCCTGNELL MRQGIPMAGN HLMTELAIVT GAVEAVVVDY QCIMPSLVQV AACYHTRFID 370 380 390 400 410 420 TAPKARFTGA VHMNFTPENA RQEASAILHM AIEAFAARDP GRVDIPVSPV NIMTGFSNEA 430 440 450 460 470 480 ILEALGGSLD PLLDAVKAGT VRGFAAVVGC NNPKVRQDSA NVGIIKELIK KDIMVLVTGC 490 500 510 520 530 540 ITTAAGKAGL LLPEGAAMAG PGLQKLCASL GIPPVLHMGS CVDNARIMHL CGLIANSLGV 550 560 570 580 590 600 DISDLPVVAS APEWYSEKAA AIGLYAVASG VYTHLGLPPN ILGSDVVTDI ALNGLEGLVG 610 620 630 ASFVVEADPV KAADLLDRRI RTKRSALGLD A

References

[1]

"Complete sequence of Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Lu M., Kiss H., Meineke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L. , Kyrpides N., Ovchinnikova G., Hazen T.C. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27774 / DSM 6949.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001358 Genomic DNA. Translation: ACL48295.1.
RefSeq	YP_002478973.1. NC_011883.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	525146.Ddes_0382.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACL48295; ACL48295; Ddes_0382.
GeneID	7284045.
KEGG	dds:Ddes_0382.
PATRIC	21734142. VBIDesDes50650_0449.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1151.
HOGENOM	HOG000228918.
KO	K00198.
ProtClustDB	CLSK862738.
Enzyme and pathway databases
BioCyc	DDES525146:GIWF-394-MONOMER.
Family and domain databases
Gene3D	1.20.1270.30. 1 hit. 3.40.50.2030. 2 hits.
InterPro	IPR016101. CO_DH_a-bundle. IPR010047. CODH. IPR004137. HCP/CODH. IPR011254. Prismane-like. IPR016099. Prismane-like_a/b-sand. [Graphical view]
Pfam	PF03063. Prismane. 1 hit. [Graphical view]
PIRSF	PIRSF005023. CODH. 1 hit.
SUPFAM	SSF56821. Prismane_like. 1 hit.
TIGRFAMs	TIGR01702. CO_DH_cata. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B8J3R0_DESDA

Accession

Primary (citable) accession number: B8J3R0

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)