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B8J1X0 (B8J1X0_DESDA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length468 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
B8J1X0 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: 4E505D0BF8A593B1

FASTA46852,796
        10         20         30         40         50         60 
MTAKNTLRNT VLDDTYAASD MANAMPRHEM PQQESRPRDV YQAIHDELML DGNSRQNLAT 

        70         80         90        100        110        120 
FCQTWVDPEI NQIMAECVDK NMIDKDEYPQ TAETETRCVH MLADLWHSPD PKGTLGCSTT 

       130        140        150        160        170        180 
GSSEAAMLGG LAMKRRWVNM RKAAGKPYDK PNMVCGPVQV CWEKFARYWD VELREIPMEK 

       190        200        210        220        230        240 
DRLIMTAEEV IKRCDENTIG VVPTLGVTFT GQYEPVEEVS KALDKLQKDK GWDIPIHVDG 

       250        260        270        280        290        300 
ASGGFLAPFI EPDLLWDFRL PRVKSINSSG HKFGLAPLGV GWVVWREKSD LPEDLIFNVN 

       310        320        330        340        350        360 
YLGGNMPTFA LNFSRPGGQI IAQYYNFLRL GREGYRRIHQ NCYDTARFLG DEIAKLGPFE 

       370        380        390        400        410        420 
VLYNGRGGIP ALCWTFKANA KTSYSLYDLS DRLRSRGWQV PAYSMPAHRE DLVVMRVLVR 

       430        440        450        460 
HGFSRDLGSL LVDDLKRAMA HFDAHPVSKP LSETEAGSNS HAGRAAKK 

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References

[1]"Complete sequence of Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Lu M., Kiss H., Meineke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Ovchinnikova G., Hazen T.C.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27774 / DSM 6949.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001358 Genomic DNA. Translation: ACL47965.1.
RefSeqYP_002478643.1. NC_011883.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING525146.Ddes_0045.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL47965; ACL47965; Ddes_0045.
GeneID7283696.
KEGGdds:Ddes_0045.
PATRIC21733330. VBIDesDes50650_0054.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OrthoDBEOG6TFCPW.
ProtClustDBCLSK928485.

Enzyme and pathway databases

BioCycDDES525146:GIWF-45-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8J1X0_DESDA
AccessionPrimary (citable) accession number: B8J1X0
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: November 13, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)