Skip Header

Contribute Send feedback
Read comments (?) or add your own

B8IUC7 (B8IUC7_METNO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056
Ordered Locus Names:Mnod_0125
OrganismMethylobacterium nodulans (strain ORS2060 / LMG 21967) [Complete proteome] [HAMAP]
Taxonomic identifier460265 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length290 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
B8IUC7 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: DC31F7BD6BEF5BCA

FASTA29030,040
        10         20         30         40         50         60 
MPFESPMMST DSPSPGTVVA VGDVRFGNHL PLSLIAGPCA LESRAHALEV AAALKEMTAP 

        70         80         90        100        110        120 
LGLGLVFKSS FDKANRTSAG SARGLGLAEA LPIFAEIRER LRLPVLTDVH EAGQCAVAAE 

       130        140        150        160        170        180 
AVDILQIPAF LCRQTDLLLA AAATGRAVNV KKGQFLAPWD MAHVAAKVTA AGNPNVIVTE 

       190        200        210        220        230        240 
RGASFGYNTL VSDMRALPIM ARVTNGAPVV FDATHSVQQP GGQGATSGGQ REFVPVLARA 

       250        260        270        280        290 
AVAVGVAGVF IETHPDPDRA PSDGPNMVPL RAMPALLGDL VAFDRLAKAL

« Hide

References

[1]"Complete sequence of chromosome of Methylobacterium nodulans ORS 2060."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Marx C.J., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ORS2060 / LMG 21967.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001349 Genomic DNA. Translation: ACL55172.1.
RefSeqYP_002495475.1. NC_011894.1.

3D structure databases

ProteinModelPortalB8IUC7.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8IUC7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7304360.
GenomeReviewsGene locus Mnod_0125 in contig CP001349_GR.
KEGGmno:Mnod_0125.
PATRIC22542484. VBIMetNod76414_0993.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG575990.
OMAESRDHAF.
ProtClustDBPRK05198.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8IUC7_METNO
AccessionPrimary (citable) accession number: B8IUC7
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info