B8IP77 (RL20_METNO) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20

Gene names

Name:	rplT
Ordered Locus Names:	Mnod_5553

Organism

Methylobacterium nodulans (strain ORS2060 / LMG 21967) [Complete proteome] [HAMAP]

Taxonomic identifier

460265 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium nodulans

Protein attributes

Sequence length	125 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. HAMAP-Rule MF_00382
Sequence similarities	Belongs to the ribosomal protein L20P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 125	125	50S ribosomal protein L20 HAMAP-Rule MF_00382		PRO_1000193967

Sequences

	Sequence		Length	Mass (Da)
	B8IP77 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: A004A4DDF3DDD5D8	FASTA	125	13,954
	10 20 30 40 50 60 MARVKRGVTS HAKHKKVLKA AKGYYGRRKN TIRIAKQAVE KGLQYAYRDR KNRKRSFRAL 70 80 90 100 110 120 WIQRLNAAVR EHGLTYSRFI DGLAKAGIVV DRKALSELAI HEPAAFSAVV EKAKAALPAE TAKAA

References

[1]

"Complete sequence of chromosome of Methylobacterium nodulans ORS 2060." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Marx C.J., Richardson P. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ORS2060 / LMG 21967.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001349 Genomic DNA. Translation: ACL60395.1.
RefSeq	YP_002500698.1. NC_011894.1.
3D structure databases
ProteinModelPortal	B8IP77.
SMR	B8IP77. Positions 3-117.
ModBase	Search...
Protein-protein interaction databases
STRING	460265.Mnod_5553.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACL60395; ACL60395; Mnod_5553.
GeneID	7306980.
KEGG	mno:Mnod_5553.
PATRIC	22552937. VBIMetNod76414_6161.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0292.
HOGENOM	HOG000035046.
KO	K02887.
OMA	GRRKNVW.
ProtClustDB	PRK05185.
Enzyme and pathway databases
BioCyc	MNOD460265:GCZK-5611-MONOMER.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL20_METNO

Accession

Primary (citable) accession number: B8IP77

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	March 3, 2009
Last modified:	May 29, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program