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B8INK7

- B8INK7_METNO

UniProt

B8INK7 - B8INK7_METNO

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Mnod_1541
Organism
Methylobacterium nodulans (strain ORS2060 / LMG 21967)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMNOD460265:GCZK-1553-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mnod_1541Imported
OrganismiMethylobacterium nodulans (strain ORS2060 / LMG 21967)Imported
Taxonomic identifieri460265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
ProteomesiUP000008207: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi460265.Mnod_1541.

Structurei

3D structure databases

ProteinModelPortaliB8INK7.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8INK7-1 [UniParc]FASTAAdd to Basket

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MNDFAHLLDR LAYEPRRSAK LRLLQDFFAH TPDPDRGFAL AAMTGSLSFR    50
EAKPGLIRGL VEERVDPVLF RMSYHYVGDL AETTALIWPA PEAAAPDAAG 100
SGHNNPPPHV PSLGEVVEAL ATIGKGELPS RLAGWLDRLD ETGRWALIKL 150
ITGELRVGVS ARLAKTAVAS LGGFEADAVE EVWHGLKAPY RALFAWVEGR 200
AERPETLNPA PFRPPMLSHP VDEETDFGKL DPAAFCAEWK WDGIRVQLVG 250
GRDRAGDQVA RIYSRTGEDI SGAFPDLAAA IGFTGALDGE LLILREGRVQ 300
SFNVLQQRLN RKAVTPKLLQ DFPAHVRAYD LLALDGEDLR ALPFAERRAR 350
LEAFVRGLDH ARIDLSPLVP FGDWEELAAA RADPASVGAG EDAEAIEGVM 400
LKRRTSAYVP GRPKGPWWKW KREPYRVDAV MMYAQRGHGK RSSFFSDYTF 450
GVWRDSPEGG EELVPVGKAY HGFTDEELAK LDRYVRNHTV KRFGPVREVE 500
YGLAKGLVLE IAFEGLQRST RHKSGVAMRF PRVSRVRWDK PPAEADRLER 550
LHEILERGER EVMPGREMVP 570
Length:570
Mass (Da):63,506
Last modified:March 3, 2009 - v1
Checksum:i9349DDF3422C3B12
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001349 Genomic DNA. Translation: ACL56533.1.
RefSeqiYP_002496836.1. NC_011894.1.

Genome annotation databases

EnsemblBacteriaiACL56533; ACL56533; Mnod_1541.
GeneIDi7307619.
KEGGimno:Mnod_1541.
PATRICi22545318. VBIMetNod76414_2396.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001349 Genomic DNA. Translation: ACL56533.1 .
RefSeqi YP_002496836.1. NC_011894.1.

3D structure databases

ProteinModelPortali B8INK7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 460265.Mnod_1541.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACL56533 ; ACL56533 ; Mnod_1541 .
GeneIDi 7307619.
KEGGi mno:Mnod_1541.
PATRICi 22545318. VBIMetNod76414_2396.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci MNOD460265:GCZK-1553-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Methylobacterium nodulans ORS 2060."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Marx C.J., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ORS2060 / LMG 21967.

Entry informationi

Entry nameiB8INK7_METNO
AccessioniPrimary (citable) accession number: B8INK7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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