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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mnod_1541

Organism
Methylobacterium nodulans (strain ORS2060 / LMG 21967)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMNOD460265:GCZK-1553-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mnod_1541Imported
OrganismiMethylobacterium nodulans (strain ORS2060 / LMG 21967)Imported
Taxonomic identifieri460265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
ProteomesiUP000008207 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi460265.Mnod_1541.

Structurei

3D structure databases

ProteinModelPortaliB8INK7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiAAWAVYF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B8INK7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDFAHLLDR LAYEPRRSAK LRLLQDFFAH TPDPDRGFAL AAMTGSLSFR
60 70 80 90 100
EAKPGLIRGL VEERVDPVLF RMSYHYVGDL AETTALIWPA PEAAAPDAAG
110 120 130 140 150
SGHNNPPPHV PSLGEVVEAL ATIGKGELPS RLAGWLDRLD ETGRWALIKL
160 170 180 190 200
ITGELRVGVS ARLAKTAVAS LGGFEADAVE EVWHGLKAPY RALFAWVEGR
210 220 230 240 250
AERPETLNPA PFRPPMLSHP VDEETDFGKL DPAAFCAEWK WDGIRVQLVG
260 270 280 290 300
GRDRAGDQVA RIYSRTGEDI SGAFPDLAAA IGFTGALDGE LLILREGRVQ
310 320 330 340 350
SFNVLQQRLN RKAVTPKLLQ DFPAHVRAYD LLALDGEDLR ALPFAERRAR
360 370 380 390 400
LEAFVRGLDH ARIDLSPLVP FGDWEELAAA RADPASVGAG EDAEAIEGVM
410 420 430 440 450
LKRRTSAYVP GRPKGPWWKW KREPYRVDAV MMYAQRGHGK RSSFFSDYTF
460 470 480 490 500
GVWRDSPEGG EELVPVGKAY HGFTDEELAK LDRYVRNHTV KRFGPVREVE
510 520 530 540 550
YGLAKGLVLE IAFEGLQRST RHKSGVAMRF PRVSRVRWDK PPAEADRLER
560 570
LHEILERGER EVMPGREMVP
Length:570
Mass (Da):63,506
Last modified:March 3, 2009 - v1
Checksum:i9349DDF3422C3B12
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001349 Genomic DNA. Translation: ACL56533.1.
RefSeqiWP_015928228.1. NC_011894.1.

Genome annotation databases

EnsemblBacteriaiACL56533; ACL56533; Mnod_1541.
KEGGimno:Mnod_1541.
PATRICi22545318. VBIMetNod76414_2396.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001349 Genomic DNA. Translation: ACL56533.1.
RefSeqiWP_015928228.1. NC_011894.1.

3D structure databases

ProteinModelPortaliB8INK7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi460265.Mnod_1541.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACL56533; ACL56533; Mnod_1541.
KEGGimno:Mnod_1541.
PATRICi22545318. VBIMetNod76414_2396.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiAAWAVYF.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciMNOD460265:GCZK-1553-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Methylobacterium nodulans ORS 2060."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Marx C.J., Richardson P.
    Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ORS2060 / LMG 21967Imported.

Entry informationi

Entry nameiB8INK7_METNO
AccessioniPrimary (citable) accession number: B8INK7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: July 22, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.