B8INK7 (B8INK7_METNO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACL56533.1

Gene names

Ordered Locus Names:

Mnod_1541 EMBL ACL56533.1

Organism

Methylobacterium nodulans (strain ORS2060 / LMG 21967) [Complete proteome] [HAMAP] EMBL ACL56533.1

Taxonomic identifier

460265 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium nodulans

Protein attributes

Sequence length	570 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACL56533.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B8INK7 [UniParc]. Last modified March 3, 2009. Version 1. Checksum: 9349DDF3422C3B12	FASTA	570	63,506
	10 20 30 40 50 60 MNDFAHLLDR LAYEPRRSAK LRLLQDFFAH TPDPDRGFAL AAMTGSLSFR EAKPGLIRGL 70 80 90 100 110 120 VEERVDPVLF RMSYHYVGDL AETTALIWPA PEAAAPDAAG SGHNNPPPHV PSLGEVVEAL 130 140 150 160 170 180 ATIGKGELPS RLAGWLDRLD ETGRWALIKL ITGELRVGVS ARLAKTAVAS LGGFEADAVE 190 200 210 220 230 240 EVWHGLKAPY RALFAWVEGR AERPETLNPA PFRPPMLSHP VDEETDFGKL DPAAFCAEWK 250 260 270 280 290 300 WDGIRVQLVG GRDRAGDQVA RIYSRTGEDI SGAFPDLAAA IGFTGALDGE LLILREGRVQ 310 320 330 340 350 360 SFNVLQQRLN RKAVTPKLLQ DFPAHVRAYD LLALDGEDLR ALPFAERRAR LEAFVRGLDH 370 380 390 400 410 420 ARIDLSPLVP FGDWEELAAA RADPASVGAG EDAEAIEGVM LKRRTSAYVP GRPKGPWWKW 430 440 450 460 470 480 KREPYRVDAV MMYAQRGHGK RSSFFSDYTF GVWRDSPEGG EELVPVGKAY HGFTDEELAK 490 500 510 520 530 540 LDRYVRNHTV KRFGPVREVE YGLAKGLVLE IAFEGLQRST RHKSGVAMRF PRVSRVRWDK 550 560 570 PPAEADRLER LHEILERGER EVMPGREMVP

References

[1]

"Complete sequence of chromosome of Methylobacterium nodulans ORS 2060." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Marx C.J., Richardson P. Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ORS2060 / LMG 21967.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001349 Genomic DNA. Translation: ACL56533.1.
RefSeq	YP_002496836.1. NC_011894.1.
3D structure databases
ProteinModelPortal	B8INK7.
ModBase	Search...
Protein-protein interaction databases
STRING	460265.Mnod_1541.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACL56533; ACL56533; Mnod_1541.
GeneID	7307619.
KEGG	mno:Mnod_1541.
PATRIC	22545318. VBIMetNod76414_2396.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	CLSK2506870.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B8INK7_METNO

Accession

Primary (citable) accession number: B8INK7

Entry history

Integrated into UniProtKB/TrEMBL:	March 3, 2009
Last sequence update:	March 3, 2009
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)