Skip Header

Contribute Send feedback
Read comments (?) or add your own

B8I983 (B8I983_CLOCE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Pyridoxal-dependent decarboxylase EMBL ACL75343.1
Gene names
Ordered Locus Names:Ccel_0981
OrganismClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) [Complete proteome] [HAMAP] EMBL ACL75343.1
Taxonomic identifier394503 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium ›

Protein attributes

Sequence length541 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarboxylic acid metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncarboxy-lyase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8I983 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: B5CFA84A6DC2FCAB

FASTA54160,732
        10         20         30         40         50         60 
MELTFNPQNF SPEETQSGET KKEILDLFSV TDSSLLKARN ETDRRVSEVI NEFIGGSEVS 

        70         80         90        100        110        120 
TDVRLNDLLT NFCKSEIPDK PLNVDEYIAF FNKNIIRHST RTSSPRYIGH MTSALPYFIK 

       130        140        150        160        170        180 
PLAGLIVTLN QNVVKAETAK VLTPYERQVI AMLHRAIYQF DSDFYNHHIQ NRESVLGILT 

       190        200        210        220        230        240 
SGGTIANLTA LWCARNSALG PCEGFNGVEK EGMDAALKFY GYKDAVIIGS AMMHYSFEKA 

       250        260        270        280        290        300 
ADLLGIGSNN SIKIPVDKNN HIDLSELRKT VEECHRKRRL IIAIIANAGT TDCGAIDPIE 

       310        320        330        340        350        360 
RVAEIAYKEG CHFHVDAAWG GPLLFSDKYR NRLKGIELAD SVTIDGHKQL YLPMGLGMIF 

       370        380        390        400        410        420 
MRNPQAAKSI EKNSNYIIRR GSIDLGRRSL EGSRPAMSIY LHAALNIIAK GGYEFLINEG 

       430        440        450        460        470        480 
IKKAEYMAGL IKSMREFELL TEPDMNMLLY RFIPERLRGK AADHMLDDAD NEVINKYNEQ 

       490        500        510        520        530        540 
LQKLQRNGGY SFVSRTSFSS ELYQNKSLVA LRAVLANPLT CEANINEVIN DQLNIAKRLN 


L

« Hide

References

[1]"Complete sequence of Clostridium cellulolyticum H10."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Ivanova N., Zhou J., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35319 / DSM 5812 / JCM 6584 / H10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001348 Genomic DNA. Translation: ACL75343.1.
RefSeqYP_002505323.1. NC_011898.1.

3D structure databases

ProteinModelPortalB8I983.
ModBaseSearch...

Protein-protein interaction databases

STRING394503.Ccel_0981.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACL75343; ACL75343; Ccel_0981.
GeneID7309811.
KEGGcce:Ccel_0981.
PATRIC19432785. VBICloCel57783_1015.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMACHFHVDA.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycCCEL394503:GJET-1006-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB8I983_CLOCE
AccessionPrimary (citable) accession number: B8I983
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info