Skip Header

Contribute Send feedback
Read comments (?) or add your own

B8I6L6 (B8I6L6_CLOCE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Dihydrodipicolinate synthase EMBL ACL74908.1
Gene names
Ordered Locus Names:Ccel_0526
OrganismClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) [Complete proteome] [HAMAP]
Taxonomic identifier394503 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length293 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Diaminopimelate biosynthesis SAAS SAAS005263
Lysine biosynthesis SAAS SAAS005263
   Cellular componentCytoplasm SAAS SAAS005263
   LigandSchiff base SAAS SAAS005263
   Molecular functionLyase SAAS SAAS005263
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processdiaminopimelate biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiondihydrodipicolinate synthase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B8I6L6 [UniParc].

Last modified March 3, 2009. Version 1.
Checksum: EC8177F517517F67

FASTA29331,661
        10         20         30         40         50         60 
MKKPIFTGSG VAIITPFTND GTDYNKLSEL IEYQIKEGTD AIIICGTTGE ASTMYDEEHK 

        70         80         90        100        110        120 
AAIKFAVEKV NKRIPVIAGT GSNHTVHAVA LSKYAEEVGA DAILTVTPYY NKTTQKGLYE 

       130        140        150        160        170        180 
HFKMVADSIK IPVVLYNVPS RTNLNIIPET IHALSKIDNI VAVKECNLSQ VGDVINLCGD 

       190        200        210        220        230        240 
DITVYSGEDG AIVPFLSMGA KGVISVLANI APKDTHDIVA KYLSGDIEGS RKLQLKTLDL 

       250        260        270        280        290 
IKALFCEVSP IPIKAAMNLM GMNVGGCRLP LVDMSDSNLE ILKTELIKYG LLL

« Hide

References

[1]"Complete sequence of Clostridium cellulolyticum H10."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Ivanova N., Zhou J., Richardson P.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35319 / DSM 5812 / JCM 6584 / H10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001348 Genomic DNA. Translation: ACL74908.1.
RefSeqYP_002504888.1. NC_011898.1.

3D structure databases

ProteinModelPortalB8I6L6.
ModBaseSearch...

Protein-protein interaction databases

STRINGB8I6L6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7309400.
GenomeReviewsGene locus Ccel_0526 in contig CP001348_GR.
KEGGcce:Ccel_0526.
PATRIC19431825. VBICloCel57783_0546.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG358848.
OMAAVKDCAY.
ProtClustDBCLSK2471758.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020625. Dihydrodipicolinate_synth_AS.
IPR020624. Dihydrodipicolinate_synth_CS.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
PROSITEPS00665. DHDPS_1. 1 hit.
PS00666. DHDPS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB8I6L6_CLOCE
AccessionPrimary (citable) accession number: B8I6L6
Entry history
Integrated into UniProtKB/TrEMBL: March 3, 2009
Last sequence update: March 3, 2009
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info